Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0066 ATGCGGGAGACGTACGACGTTGTCGCCGAGGAAGAAGCACCACCGTCGCCGTCCATGAAGGGCGGCGACGCTTGCTCGGGTGTCGTTTTGTTCGGAAAATACGAGGTAAAGAAATTGTTAGGTGTGGGAGGTTTTGCCAAGGTGTATCACGCGAGGAATGTGAGTACTGGACAGAGCGTGGCTATCAAAGTCGTGAGCAAGCGCGAAATTTTTAAAGAAGGCCTCACGGTGCACATTGAGAGGGAAATCTCTATCATGCGCCGGCTGCACCATCCCAACACCCTCAAGCTCTTCGAAGTCCTCGCTTCCAAGACCAAGATTTACTTCGTCCTGGAATTCGCCGAGGGAGGCGAGCTCTTCTACATGGTCGCGCAGGGACGATTCTCCGAGGATCTCAGCCGTCGGTACTTCCATCAGTTGATCTCCGCAGTCCAGTACTGCCATTCCGCCGGCGTATTCCACCGCGACCTCAAGCTCGATAACCTCTTGATCGACGCGAACATGAACCTCAAGGTTTCAGACTTCGGGTTGAGCGCGCTCAAGGACCATGTCCGACCCGACGGACTGCTCCACACCGTTTGCGGCACGCCGGCGTATGTCGCGCCGGAGCTGCTCGCAAAGAAAGGCTACGACGGAGCGAAGGCGGATGTGTGGTCGTGCGGCGTCATCCTCTTCGTCCTCACCGCCGGGTACTTGCCGTTCAATGACCACAATCTCGCGGTCATGTACAGGAAGATCTACCGAGGGCAATTTCGGTTCCCGAGATGGACGTCGCCGGAGCTCCGGCGATTCCTGTCGCGGTTGCTGGACAAGAATCCGGAGACGAGGTTCACCATCGACGAGATCCTCCGGGACCCATGGTTCAGCAAAGGGTACAGGAAAGTCCGGGTCCAGGACAAGGAGTTCGAATTGGATCAGGAGACCCGACCGAAGGGATTGAACGCCTTCGATTTGATATCGTTTTCGTCCGGGTTTGATATGTCCGGTTTATTTACCGTGCCGGAAGTTTCGGATTGCGTGGAACGCATCGTTTCGGGGGAGAAACCGAAGAGGGTAATGGAGAAGGTCGAAGAGGTGGCAAAGGCGGAGAGAGTGAGTGTGAAGATGAAGGAGAATGGGTTCGGGGCGAAGCTGGAGGGGCAGGATGGTAATTTAGTGGTTCTCGTTGGGATTTACCGGCTAACGGATAAACTGGTTGTTGTTGAGGTAAAGAAAAGGGAAAGGAGAGTTGGAAATGGTCGACAATTCTGGGAGGATAAATTGAGGCCTCAGCTTCACAAGTTAGTTTATAAACCGGAATCACGGGTCTTCGGTGAAGAAAAATAA 1326 0.5422 MRETYDVVAEEEAPPSPSMKGGDACSGVVLFGKYEVKKLLGVGGFAKVYHARNVSTGQSVAIKVVSKREIFKEGLTVHIEREISIMRRLHHPNTLKLFEVLASKTKIYFVLEFAEGGELFYMVAQGRFSEDLSRRYFHQLISAVQYCHSAGVFHRDLKLDNLLIDANMNLKVSDFGLSALKDHVRPDGLLHTVCGTPAYVAPELLAKKGYDGAKADVWSCGVILFVLTAGYLPFNDHNLAVMYRKIYRGQFRFPRWTSPELRRFLSRLLDKNPETRFTIDEILRDPWFSKGYRKVRVQDKEFELDQETRPKGLNAFDLISFSSGFDMSGLFTVPEVSDCVERIVSGEKPKRVMEKVEEVAKAERVSVKMKENGFGAKLEGQDGNLVVLVGIYRLTDKLVVVEVKKRERRVGNGRQFWEDKLRPQLHKLVYKPESRVFGEEK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0066 441 MobiDBLite consensus disorder prediction 1 20 - -
Dere11g0066 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Dere11g0066 441 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Dere11g0066 441 Gene3D Kinase associated domain 1, KA1 315 431 - -
Dere11g0066 441 ProSiteProfiles Protein kinase domain profile. 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0066 441 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0066 441 SMART serkin_6 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0066 441 Pfam NAF domain 310 368 IPR004041 GO:0007165
Dere11g0066 441 FunFam Aurora kinase A 28 117 - -
Dere11g0066 441 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Dere11g0066 441 SUPERFAMILY Protein kinase-like (PK-like) 30 298 IPR011009 -
Dere11g0066 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 28 412 - -
Dere11g0066 441 FunFam Non-specific serine/threonine protein kinase 114 295 - -
Dere11g0066 441 Gene3D Transferase(Phosphotransferase) domain 1 28 314 - -
Dere11g0066 441 CDD CIPK_C 314 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0066 Dere-ChrDere11 901715 903040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0066 30 433 CBL-interacting serine-threonine protein kinases AT5G01820 61.501 9.98e-175 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere11g0066 Pkinase 8.6e-70 CL0016