Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0053 ATGTGGAAATTTCGTAGCGGGCATCGCTCACCTGGGAAGAAACCTCCTTTTTCGCCAAATATAAAGCCTCGTTTTTGGTATCTTCGTTTTCTGCGTCGCTTGCTTGCTCTATCCACTGTGCTTACATACGAAGAAAGAAAGAGAGAAGCTGAGATGGAGAATTTGCCTTTGGATCATAGAAAGGCGATTCAAGAGCTGGAGAGAGGGCGTGAGTTCGCGAGCCAGCTCCGGCGAGTGATTCAGAACTCCAATGGCGGAGACGGTGATAAGACGACGCCGTTTGCTGAAGATCTTGTGGAGAAGGTGGTGAAGTCCTTTTCCAATAGCCTCTTGCTCTTGAATCTCCGCAGTTCCGAATCGGACGACGTCGTCTCCCAAATGCAACAACAGCTCACTGATTCTTCTTGCTTGGTTCCCGCCAAATCTGACGACACTGCCGATAGTTGCAAGAGTACTTCGGCTCCTAAGGAACGAAGAGGCTGTTACAAGAGAAGGAGAACATCACAGGCACTGAAGAAGGACTCTGAAACTCCAATAGATGATGGCCATGCATGGAGAAAGTATGGCCAAAAGATTATAATGAATGCCAAATACCCCAGGAACTACTTCAGGTGCACTCACAAGTTTGATCAGGGATGCCGAGCAACCAAACAGGTGCAGAGAATTCGAGAGGAGCCTGTGCTGTACAGGACAACCTATTACGGCCATCACACTTGCAACAGAAACTTGCTAAACCCTGAGATCATTATCGATTCTAATTCTCCTTCAGATTCTTCCATATTGCTCAGGTTCGACAAGACCCTCCCCACCGAACAAGACCACCTCTTCTTCTCATCATCATCGTCATCATCTCTTCCCTTGACCAAAAAACAGTGTAAGGAAGAGATCCCCTCGCCTACATCAGAGGATTACCTGTTCTCCAGTGAACTTATCCCCATATCTTCCGCCCTGGAATCAGGCCTCACGGATCCCACTTCTGATATGTTGTATGATTCTATTGACATTGATCATGTCTTCGAGCACTTAGAGTTTGGTCTGTAA 1041 0.4717 MWKFRSGHRSPGKKPPFSPNIKPRFWYLRFLRRLLALSTVLTYEERKREAEMENLPLDHRKAIQELERGREFASQLRRVIQNSNGGDGDKTTPFAEDLVEKVVKSFSNSLLLLNLRSSESDDVVSQMQQQLTDSSCLVPAKSDDTADSCKSTSAPKERRGCYKRRRTSQALKKDSETPIDDGHAWRKYGQKIIMNAKYPRNYFRCTHKFDQGCRATKQVQRIREEPVLYRTTYYGHHTCNRNLLNPEIIIDSNSPSDSSILLRFDKTLPTEQDHLFFSSSSSSSLPLTKKQCKEEIPSPTSEDYLFSSELIPISSALESGLTDPTSDMLYDSIDIDHVFEHLEFGL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0053 346 MobiDBLite consensus disorder prediction 140 176 - -
Dere11g0053 346 SUPERFAMILY WRKY DNA-binding domain 176 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere11g0053 346 Pfam WRKY DNA -binding domain 180 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0053 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 64 258 IPR044810 GO:0003700
Dere11g0053 346 SMART WRKY_cls 179 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0053 346 Gene3D WRKY domain 164 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere11g0053 346 ProSiteProfiles WRKY domain profile. 174 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0053 Dere-ChrDere11 649997 651670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0053 61 252 WRKY Transcription Factor Family AT3G56400 39.512 2.95e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere11g0053 WRKY 1.3e-23 CL0274