Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0048 ATGAGGAACATCAATCGGTGGTGTGTTCCAGTCTTTCTTTATGTGCTTTTAGCTATTCAACTTATCCGAGCTGATGATTATGTACCCACCGATAAAATACTCTTGAATTGTGGGGGTCCTTCGGATTCAACTGACACCGATGGCCGGAAGTGGACCAGTGATATTGGGTCCAAGTTCACATCGTCGGCCGGAGACTCCACCACGTCAGAGGCAGCAACTCAGGACCCTGAGATACCTGAAGTTCCATACATGACTGCTCGAGTCTTCCGATCAGAATTCACCTATAGTTTTCCGGTGGCTCCGGGTCGGAAATTTGTCCGTCTATACTTTTATCCGGCTTCCTACTCAGGCCTTAATGCATCCAATGGTCTCTTCGCTGTCACCTCGCAATCCTACACTCTTCTAAAGAACTTCAGCGTTGCTCAGACCACAGCGGCTTTGAATTTCGACTTCATTGTAAAGGAGTACTTGATCAATGTTGAAGATAAAACGCTGAATGTGACTTTTACTCCATCTAAGAATGCTTCGAATGCCTATGCATTTGTTAATGGGATTGAGATTGTGTCCATGCCTGATATTTATAGTTCCACCGATGGGACTACCATGATTGTGGGTTTAGATAGTCCTTTCCTCATTGACAACAGCACTGCACTTGAAAATGTCTATAGGTTGAATGTTGGTGGTAATGATATCTCACCCTCCCACGATACAGGTCTGTTTAGGTCTTGGTCTGATGACACCCCGTACCTGTATGGGGCTGGGTTTGGAGTAACACTGCTTGCTGATCCGGCGGTGAAAATTGAATATCCTCCAGGCACGCCTTCTTATATTGCTCCTCTTGATGTTTACAGTACTGCAAGATCAATGGGCCCAGATGTCAATGTCAACTTGAATTATAATTTAACTTGGATTTTCTCAGTTGATTCGGGGTTTTCATATCTCGTGAGACTCCATTTTTGTGAGGGCACTACTAATATAACCAAGATTAATCAAAGAGTGTTTAATATATTTCTTTTTAATCAGACTGCTGCGGAAGGGGCTGATGTTATTGCCTGGGCAAGGGATTCTGGTCTTTCACATGCAAATGGGGTTCCAGTGCATAAGGATTATATTGTATTTGTTCCTAATGGGCAACCACAGCAGGATCTGTGGCTTGCACTGCATCCAGATATTGCTGAAAAGCCCCAATATTATGATGCAATCTTGAACGGAGTGGAGATATTTAAAATTAATGATAGCACAGGTAATCTTGCAGGGGCAAATCCTATTCCTGCTCCTCAGCAAGATGAGATTGACCCATCATTGGCCAGACCCTCTAGTCATGGTAAATTAAAGAATCAGACAGGAATAATTGGTGGTGGTGTTGGCGGAGGAGTTGTTTTAGTACTTGTCATTGGACTTTTGGCTTTTTGTGTATCTCATCGTTGTAGGCATGGAAAGGATTCTAGTGCAAGTGAAGGGCCATCTGGTTGGCTCCCGCTTTCTCTTTATGGTAATTCACACTCTGCAGGTTCTGCCAAGACCAACACAACAGGAAGTTATGCATCCTCTCTCCCATCAAACCTTTGTCGTCATTTCTCATTTGCTGAAATTCAGGCTGCCACAAACAACTTTGATGAGGCTTTGGTCCTTGGTGTGGGAGGATTCGGCAAGGTTTACAAAGGAGAAATTGATGGTGGAACGATGAAAGTAGCAATTAAGCGTGGCAACCCACTTTCTGAGCAGGGGGTACATGAATTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGCCATCGTCACCTTGTTTCACTGATTGGCTACTGTGAGGAAAACTGTGAAATGATCCTTGTCTATGATTACATGGCTCATGGAACACTCCGAGAGCATCTATACAAGACCCAAAAACCTCCACTACCATGGAAGCAAAGGCTTGAGATATGTATTGGAGCAGCTCGAGGGTTACATTATCTACACACAGGTGCCAAGCATACCATCATCCACCGAGATGTGAAAACAACTAACATCTTACTTGATGAGAAGTGGGTGGCAAAGGTCTCTGATTTTGGATTGTCAAAAACTGGCCCTACGTTGGACAACACACATGTGAGTACTGTTGTCAAGGGTAGTTTTGGGTACTTAGATCCTGAATATTTCAGGAGGCAGCAACTAACTGATAAATCTGATGTTTATTCATTTGGTGTGGTTCTCTTTGAGATATTGTGTGCTCGCCCAGCTTTGAATCCAACCCTTCATAAAGAGCAAGTTAGCTTAGCAGAGTGGGCTTCTCATTGCCACAAGAAAGGCATTCTTGACCAAATTGTCGATCCTTATCTGAAGGGCAAGATAGCACCAGAATGCTTCAAGAAGTTTGCAGAGACTGCCATGAAGTGTGTGGCTGACCAGGGTATTGACAGGCCATCAATGGGTGATGTGTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAGAGTGGGAAGGGAATTGGTGAAATGCCCAGTGAAGAAGAGCCACTCTTTGCAGATCCTAATGTGAAGAAGGACCCTAATGGTTTTGAAGGTAATGTGAGTGACTCCCGAAGCAGTGGGATTAGCATGAGCATAGGTGGTCGAAGCTTAGCCAGTGAAGACTCTGATGGGTTAACACCTAGTGCTGTCTTTTCCCAGATCATGAATCCAAAAGGGCGTTAA 2682 0.4422 MRNINRWCVPVFLYVLLAIQLIRADDYVPTDKILLNCGGPSDSTDTDGRKWTSDIGSKFTSSAGDSTTSEAATQDPEIPEVPYMTARVFRSEFTYSFPVAPGRKFVRLYFYPASYSGLNASNGLFAVTSQSYTLLKNFSVAQTTAALNFDFIVKEYLINVEDKTLNVTFTPSKNASNAYAFVNGIEIVSMPDIYSSTDGTTMIVGLDSPFLIDNSTALENVYRLNVGGNDISPSHDTGLFRSWSDDTPYLYGAGFGVTLLADPAVKIEYPPGTPSYIAPLDVYSTARSMGPDVNVNLNYNLTWIFSVDSGFSYLVRLHFCEGTTNITKINQRVFNIFLFNQTAAEGADVIAWARDSGLSHANGVPVHKDYIVFVPNGQPQQDLWLALHPDIAEKPQYYDAILNGVEIFKINDSTGNLAGANPIPAPQQDEIDPSLARPSSHGKLKNQTGIIGGGVGGGVVLVLVIGLLAFCVSHRCRHGKDSSASEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIQAATNNFDEALVLGVGGFGKVYKGEIDGGTMKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLHKEQVSLAEWASHCHKKGILDQIVDPYLKGKIAPECFKKFAETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEESGKGIGEMPSEEEPLFADPNVKKDPNGFEGNVSDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0048 893 SMART serkin_6 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0048 893 MobiDBLite consensus disorder prediction 820 893 - -
Dere11g0048 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Dere11g0048 893 MobiDBLite consensus disorder prediction 851 886 - -
Dere11g0048 893 Pfam Malectin-like domain 35 410 IPR024788 -
Dere11g0048 893 Gene3D Transferase(Phosphotransferase) domain 1 615 827 - -
Dere11g0048 893 FunFam Receptor-like protein kinase FERONIA 510 614 - -
Dere11g0048 893 Gene3D - 33 190 - -
Dere11g0048 893 Gene3D - 217 411 - -
Dere11g0048 893 SUPERFAMILY Protein kinase-like (PK-like) 513 811 IPR011009 -
Dere11g0048 893 ProSiteProfiles Protein kinase domain profile. 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0048 893 FunFam FERONIA receptor-like kinase 32 191 - -
Dere11g0048 893 FunFam FERONIA receptor-like kinase 216 411 - -
Dere11g0048 893 CDD STKc_IRAK 544 810 - -
Dere11g0048 893 FunFam Receptor-like protein kinase FERONIA 615 825 - -
Dere11g0048 893 Pfam Protein tyrosine and serine/threonine kinase 543 806 IPR001245 GO:0004672|GO:0006468
Dere11g0048 893 PANTHER OS03G0124300 PROTEIN-RELATED 12 479 IPR046957 GO:0004672
Dere11g0048 893 Gene3D Phosphorylase Kinase; domain 1 500 614 - -
Dere11g0048 893 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0048 Dere-ChrDere11 618836 621517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0048 18 893 Receptor kinase-like Gene Family AT3G51550 75.057 0.0 1335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere11g0048 Malectin_like 6.8e-38 CL0202