Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0045 ATGCTGCAATCCAACCGAATTACAATACCAACTTTCCTACTCCTGCTTCTCTTTTCGCAAACTTTGGCTGATCAAAATTCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCAGTTCATCATGGCCAAAAAATCAATTGGAATTCTAATACCTCAATGTGCACTTCTTGGGTGGGAATCACTTGCAGCCCAAATGGCACTCATGTGCTTGCCGTGCGACTTCCTGGTGTTGGACTGCGTGGTTCTCTCCCTGCCAATACAATTAGTAAGCTGGATGGTCTCATGGTACTCAGCCTTCGGTCCAATAGCCTGAGCGGACATCTTCCAAATGACATACTTTCCCATCCTTCTCTCCGCTTTATATATCTGCAATGTAACAACTTTTCAGGTGATATCCCTGACTCTTTGTCTCACCAGCTTAAGTTTCTTGATCTTTCCTACAACTCTTTCACAGGAACAATTCCAGCCTCAATTCAGAATTTGACAAATCTAACTGGATTAAACCTCCAGAATAACTCTCTCAAGGGACCAATCCCTGATTTAAACCTCCCCAAGCTTAAGACTTTGGATTTGAGCTACAACAGCTTAAATGGTTCAATTCCTTCAGCCCTCCAGAAGTTTCCTGCCACCTCATTTCAAGGGGATCTGATGTTATGTGGACCACCTTTACACCAATGTTCTTCAGTTTCCCGATCTCACCTACTGCCTCCACCAACAGTCTCATCAAAGCCAAGCGATCTCTCCAACAAGAAGCTGGGTACAGGGGCCATAATTGCAATTGCCTTTGTAGGTTTCACACTGCTGTTTCTTCCATTTCTGATGGTAATATTATACTGTCTCAAGATAAGAGATGGTGGACAAAATGTAGCACCTAAAGAGAAGGATGAGAAGCTTAAAGAGGACTTTGGGAGCGGAGTGCAAGAACCAGATAAAAACAAACTAATATCTTTTGAAGGCTGTTCCCTCAGTTTTGATCTTGAGGATCTATTAAGAGCTTCTGCTGAAGTTCTTGGGAAGGGAAGTTGTGGGACGACTTATAAAGCTATATTGGAGGAGGGTACTGCAGTGGTTGTGAAGAGGTTAAAAGAATTGGTGGTGGGGAAAAAAGAGTTTGAACAGCAAATGGAGACAGTGCGAAGGCTTGGTCATCACCGAAATGTTATTCCTATTCGTGCTTACTACTACTCTAAGGACGAAAAACTACTGGTTTATGATTACGTATCAGCTGGAAGCTTTTCCAGGCTATTGCATGGAACGAAGGGAGCTGGACGAACTCCTTTAGATTGGGAATCCAGAGTGAAGATCGCACTTGGTGCTGCTAAGGGAATTGCACATATCCACTCTGCCAGTGGAAAGAAATTTGTCCATGGCAACATAAAGTCATCTAATGTGCTTCTCACAACAGATTTTGAAGGCAGCATATCAGATTTTGGCTTAACCCCCCTAATCAGTTTCTCTGTCCCATCCAGAAGTCCAGGCTACCAAGCACCTGAGGCTATGGAAGCCCGAAAATCCTCCCAGAAGTCTGATGTATATAGCTTTGGGGTTGTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGATGTGGTAGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGGGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTACCCAAATATTGAAGAAGAACTGGTGCAGATGCTGCAATTAGCAATGGCATGCGTGGCAAGGGAGCCAGACACGAGGCCTTCAATGGAGGAAGTCGTTAGAATAATTGAAGTGATCGGAGCATCCAATTGA 1818 0.44 MLQSNRITIPTFLLLLLFSQTLADQNSEKQALLDFAAAVHHGQKINWNSNTSMCTSWVGITCSPNGTHVLAVRLPGVGLRGSLPANTISKLDGLMVLSLRSNSLSGHLPNDILSHPSLRFIYLQCNNFSGDIPDSLSHQLKFLDLSYNSFTGTIPASIQNLTNLTGLNLQNNSLKGPIPDLNLPKLKTLDLSYNSLNGSIPSALQKFPATSFQGDLMLCGPPLHQCSSVSRSHLLPPPTVSSKPSDLSNKKLGTGAIIAIAFVGFTLLFLPFLMVILYCLKIRDGGQNVAPKEKDEKLKEDFGSGVQEPDKNKLISFEGCSLSFDLEDLLRASAEVLGKGSCGTTYKAILEEGTAVVVKRLKELVVGKKEFEQQMETVRRLGHHRNVIPIRAYYYSKDEKLLVYDYVSAGSFSRLLHGTKGAGRTPLDWESRVKIALGAAKGIAHIHSASGKKFVHGNIKSSNVLLTTDFEGSISDFGLTPLISFSVPSRSPGYQAPEAMEARKSSQKSDVYSFGVVLLEMLTGKTPVQYSGHDDVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLAMACVAREPDTRPSMEEVVRIIEVIGASN 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0045 605 SUPERFAMILY Protein kinase-like (PK-like) 335 599 IPR011009 -
Dere11g0045 605 Gene3D Phosphorylase Kinase; domain 1 299 406 - -
Dere11g0045 605 FunFam pollen receptor-like kinase 1 299 406 - -
Dere11g0045 605 FunFam Probable inactive receptor kinase RLK902 25 182 - -
Dere11g0045 605 CDD STKc_IRAK 337 599 - -
Dere11g0045 605 Pfam Protein kinase domain 334 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0045 605 Gene3D Ribonuclease Inhibitor 182 227 IPR032675 -
Dere11g0045 605 PANTHER OS05G0588300 PROTEIN 12 601 - -
Dere11g0045 605 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Dere11g0045 605 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 407 605 - -
Dere11g0045 605 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Dere11g0045 605 Gene3D Transferase(Phosphotransferase) domain 1 408 605 - -
Dere11g0045 605 ProSiteProfiles Protein kinase domain profile. 331 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0045 605 Pfam Leucine Rich Repeat 185 207 IPR001611 GO:0005515
Dere11g0045 605 SUPERFAMILY L domain-like 41 207 - -
Dere11g0045 605 PRINTS Leucine-rich repeat signature 183 196 - -
Dere11g0045 605 PRINTS Leucine-rich repeat signature 140 153 - -
Dere11g0045 605 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0045 Dere-ChrDere11 576967 579417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0045 12 605 Receptor kinase-like Gene Family AT5G58300 59.635 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere11g0045 Pkinase 3.1e-35 CL0016