Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0039 ATGAACGACGCAGATGTATCAAGGCAGATCCAGCAGATGATCAGATTCATTCGCCAAGAGGCTGAGGAGAAAGCTAACGAAATCTCCGTCACTGCCGAAGAGGAATTCAACATCGAGAAGCTTCAGTTACTTGAAGCTGAGAAGAGAAAGATCAGACAAGAGTATGAGCGAAAAGCCAAACAGGTTGACGTTCGTAAAAAGATTGAATACTCGATGCAGCTGAATGCTTCGCGTATAAAAGTACTTCAAGCACAAGATGAAGTGGTGAATTCCATAAAGGAATCTGCTAGCAAGGCGCTTTCACGTATCTCTGATGATAAGAACGTATACAAGAAACTGCTCAAAACCTTGATTGTCCAGGGTTTAGTGAGGCTGAGAGAACCGTCGGTGATACTGCGATGCAGAGAGGTTGATCGGAAGCTAGTGGAGTCAGTACTGGATGAAGCCAGAAAGGAATACTCAGAGAAAGCCAAAGTCCAACCACCGAAGGTTACCCTTGATGAGCGTGTTTATCTCCCTTCTAATCCAAAATCTGACGCCACTGCTTCCTATGAACCTTTTTGCTCGGGAGGAATAGTTTTGGCATCGGAGGATGGGAAGATAGTGTTGGAGAACACTCTTGACGCAAGGCTAGATGTTATCTTCCGTCAGAAACTCCCAGAGATCCGGAAGCGCATTCTAGGTTGA 687 0.4541 MNDADVSRQIQQMIRFIRQEAEEKANEISVTAEEEFNIEKLQLLEAEKRKIRQEYERKAKQVDVRKKIEYSMQLNASRIKVLQAQDEVVNSIKESASKALSRISDDKNVYKKLLKTLIVQGLVRLREPSVILRCREVDRKLVESVLDEARKEYSEKAKVQPPKVTLDERVYLPSNPKSDATASYEPFCSGGIVLASEDGKIVLENTLDARLDVIFRQKLPEIRKRILG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0039 228 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dere11g0039 228 Gene3D - 91 228 IPR038495 -
Dere11g0039 228 Coils Coil 38 61 - -
Dere11g0039 228 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dere11g0039 228 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
Dere11g0039 228 Gene3D - 1 62 - -
Dere11g0039 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0039 Dere-ChrDere11 518308 520283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0039 1 228 Primary Pumps ATPases(2) AT3G08560 69.737 5.93e-117 331