Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0025 ATGATGATCTCTGGTATGCTTCTTGTTTTTTTCACTCTCTTTTTCATGAGATTGGTTAGACAGTTGAGAAAATCTGGTTCGGATCGAGAGAAGCTGCCACCTGGTCCAACGAGGCTGCCTCTTATAGGAAACCTTCACCTGCTCCATGATTTGCCTCACCTTACATTCCAGAAACTTTCGGCTCAATATGGACCCCTCATGCACTTGCAATTGGGTTCCATACCCACTGTGGTGGTCTCATCCTCTGACATGGCCAGAGAGATTTTCAAGAACCACGATCTTGCTTTCTCAGGGAGACCAGTGTTATATGCTGCGAAGCGGCTGAGCTATAACGGCTCTACTGTGAGTTTTGCTCCTTATGGTGACTACTGGAGGCAGATCAGGAAGATTGTGATATTGGAGCTTCTGAGTTCAAGGAGGGTTCGAGCGTTTCAAGCAGTGAGGGCTCAAGAGCTCAAGCTTTTCCTTGATTCTATAGCTCGTAGTACTTCAACTTCAGGCCCTGTAAATCTAAGCGAATTGTCCCTTTTGCTGAGTAACAACATAGTATGCCGGATTGCTTTTGGTAGAAGAATGTATGAGGGAGAAGAAGCAGATAATAATGCAAGCAAGTTCCGTGAAATGATCAAAGAAACGCAGGAGTTGTTGGGAGGGTTCTGTCTAGCTGATTTCTTTCCACGGTTGGGATGGCTTAACAAGCTCAATGGCCTCGATCGTAGAATACAGAAGAACTTAAGAGAATTGGATCACTTCTATAACAAAGTGATCAATGAGCATAAGGATTCAAATAAGCATGAAGCTGAGTATAAAGATCTCGTTGATGTGCTTATTCAGGCTCAGAAGGATCCAAATCAGGCGATTTCCATTACTGATGACCAAATAAAGGGTGTATTAATGGACATCTTTCTTGCAGGCACTGACACATCTTCAGCTACACTGGTGTGGACAATGGCTGAGTTGATTAGGAACCCAGAATCAATGAAAAAAGTACAAGAGGAGGTGAGAGAAGTTGCCAAGGAAAAAGAGATGGTGGAAGAGAGTGAACTGGGAAGCCTGACGTGCCTCAAGTCAGTAGTGAATGAGGCATTGAGACTGCATCCACCAGCACCATTACTTCTTCCAAGAGAAACAACCGAGACTTGTAATATCAAAGGGTTCGAGATTCCAGCGAAAACGAGGGTGTTTGTGAATGCGAAAGTCATAGGGTTAGATCCAAATCGCTGGAAGAATCCAGAAGAGTTCAAACCAGAGAGGTTTCTGCATATTTCAGACAGAGGAGATCAGTTTGAGATGTTGCCATTCGGGGCTGGACGAAGGGGCTGTCCAGGAGTGAACTTCGCTATGCCAATAGTAGAGCTCGCACTTGCAAATCTTGTGCATCGTTTTGACTGGAAACTTCCCAATGGCATGAAGAGTGAACAACTTGATATGGAAGAAGCATTTGGCGTTACAATGCACAAGAAATTACCTCTTTGGCTAATACCGGCCCCTGTTCGTCTGTAG 1503 0.4458 MMISGMLLVFFTLFFMRLVRQLRKSGSDREKLPPGPTRLPLIGNLHLLHDLPHLTFQKLSAQYGPLMHLQLGSIPTVVVSSSDMAREIFKNHDLAFSGRPVLYAAKRLSYNGSTVSFAPYGDYWRQIRKIVILELLSSRRVRAFQAVRAQELKLFLDSIARSTSTSGPVNLSELSLLLSNNIVCRIAFGRRMYEGEEADNNASKFREMIKETQELLGGFCLADFFPRLGWLNKLNGLDRRIQKNLRELDHFYNKVINEHKDSNKHEAEYKDLVDVLIQAQKDPNQAISITDDQIKGVLMDIFLAGTDTSSATLVWTMAELIRNPESMKKVQEEVREVAKEKEMVEESELGSLTCLKSVVNEALRLHPPAPLLLPRETTETCNIKGFEIPAKTRVFVNAKVIGLDPNRWKNPEEFKPERFLHISDRGDQFEMLPFGAGRRGCPGVNFAMPIVELALANLVHRFDWKLPNGMKSEQLDMEEAFGVTMHKKLPLWLIPAPVRL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0025 500 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 FunFam Cytochrome P450 83B1 20 494 - -
Dere11g0025 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Dere11g0025 500 Coils Coil 327 347 - -
Dere11g0025 500 Gene3D Cytochrome P450 17 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0025 500 PANTHER CYTOCHROME P450 71B11-RELATED 14 496 - -
Dere11g0025 500 CDD CYP71-like 62 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0025 Dere-ChrDere11 312133 313854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0025 8 495 Cytochrome P450 AT3G26310 43.232 3.50e-145 424