Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0024 ATGGAAACACGATCAGGAAAATTACAGAAAACGACATTGAAGGAGGGGCAGAGGAGGAGCCCGCGATTATCTGCAAAGGAAGCTTCGCAGACCAATGGGTCCGGGTCCGGGTCAGCGAGTGACCCGGTTGTACACTCAGATGAATCCAAAGGCAAAGGTGGAAGTACTTGCACTGTCAAAATGAGACGGCACTTGGTTAACGATCAGGGACCAGCTTTTCGGACAAGGGGTAGAAAGAAGAGGAAGCTGAGGCCGGTTGAAGAATTGACTCCATCTTCAGTAATATCTCCACCCAAGCAGGTTTACAATCCATTCAAACAATTGCAGGGTGGGAAAAAATCTAATGATGAAAATATTCAGAAGAAAACTGCAAATCAACCATCAAAGTTGCCATCTGCAACCTGTATGCCAGAGAAACGGATACTTGAACTTGTCCTTGACATTTTACAAAGGAGAGACACTCACGAAATATTTGCTGAACCAGTTGATCCAAAAGAGGTTGAGGATTATTACGAAATAATAGAAGAGCCTATGGATTTTGGCACCATGAGGGCTAAACTACATGAAGGAATGTACAAGAGTCTAGAACAATTTGAGTATGATGTTTTCCTAATTTTCAACAATGCAATGCATTTTAATTCTTCTGTTACCATATATTTCAGGCAGGCCCGTTCTATAAGTGAGCTAGCTAAGAAGGTTTTCAATGTTTTAAAATCCAATCCTGAGAATTTTGAACTGGAATTCTCAGAAACAAGACATAGGACGAGTAGGAGAAACCAAGGAGATTTTAGGGATTCAGCAAATGTAAAATTCAGTGAATCCACTGGCAGTATGTCCTCAAAGATCATGCCATGTTCTTCCCATGCTGCACCAAACAGGAAAAGCTTCAAGTCAAATCATGGGCGGTCTGACATTGGTAAGCCTGTTGATTCTAGAAATCTTGAGGATCCCATGGGTACTAGAGATAGTGGAAGATATAAATTTGAAGTCAATAAGCGCTATACGTATAGACCTTCCCTGTCCCTTAATGAGGAAGAGTCAAGTTTTCCAACAGTTTATGGTAAACTGAACCTGCTTGAGCATGTTAATCAGCATGATATAGGCTACAGAGAAAGCTTGATGATGTTTGTTAAAGATTTAGGACAAGCAGCCCAAAATGTAGCGAGGAGGAAGTTATTTGGATGTGAAATTCATACAGCATCTGCTTCTGCTCCAGGACCTAATATACTAATTGCAGACACTGCCTCAATGTCTCAGAATCCCTTAAACGGGTTTCCTGGTAATCCTCCTAATGAGACAAGAAGTTCCCGCGACAGTATTAATTTGAAGATTGCCACTGATGGATCCAAAGAAACAGGCAAGAAGTCTGCGACAATATTACTGGACAAATCCAAGTCAATTATCCAAGAACAGCTGTCAGAATCATCAGCTATGGAGCATTCTCAGACCCTGTCAACATCAAGGTTGTTCAAGATAGACTCAGGTGGTGTTGAGAGGCCATACTCTGTTCAAGTGAGTTACGACTTACAGGGGATGATTGAAATGCAACCATCCAACTCATCTGATATTGTGTGA 1575 0.4159 METRSGKLQKTTLKEGQRRSPRLSAKEASQTNGSGSGSASDPVVHSDESKGKGGSTCTVKMRRHLVNDQGPAFRTRGRKKRKLRPVEELTPSSVISPPKQVYNPFKQLQGGKKSNDENIQKKTANQPSKLPSATCMPEKRILELVLDILQRRDTHEIFAEPVDPKEVEDYYEIIEEPMDFGTMRAKLHEGMYKSLEQFEYDVFLIFNNAMHFNSSVTIYFRQARSISELAKKVFNVLKSNPENFELEFSETRHRTSRRNQGDFRDSANVKFSESTGSMSSKIMPCSSHAAPNRKSFKSNHGRSDIGKPVDSRNLEDPMGTRDSGRYKFEVNKRYTYRPSLSLNEEESSFPTVYGKLNLLEHVNQHDIGYRESLMMFVKDLGQAAQNVARRKLFGCEIHTASASAPGPNILIADTASMSQNPLNGFPGNPPNETRSSRDSINLKIATDGSKETGKKSATILLDKSKSIIQEQLSESSAMEHSQTLSTSRLFKIDSGGVERPYSVQVSYDLQGMIEMQPSNSSDIV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0024 524 PANTHER BROMODOMAIN CONTAINING PROTEIN 9 483 - -
Dere11g0024 524 MobiDBLite consensus disorder prediction 274 322 - -
Dere11g0024 524 MobiDBLite consensus disorder prediction 297 322 - -
Dere11g0024 524 PRINTS Bromodomain signature 183 201 IPR001487 GO:0005515
Dere11g0024 524 PRINTS Bromodomain signature 167 183 IPR001487 GO:0005515
Dere11g0024 524 PRINTS Bromodomain signature 201 220 IPR001487 GO:0005515
Dere11g0024 524 PRINTS Bromodomain signature 153 166 IPR001487 GO:0005515
Dere11g0024 524 Gene3D - 132 259 IPR036427 GO:0005515
Dere11g0024 524 MobiDBLite consensus disorder prediction 1 118 - -
Dere11g0024 524 MobiDBLite consensus disorder prediction 1 22 - -
Dere11g0024 524 SMART bromo_6 131 239 IPR001487 GO:0005515
Dere11g0024 524 MobiDBLite consensus disorder prediction 23 43 - -
Dere11g0024 524 ProSitePatterns Bromodomain signature. 155 212 IPR018359 -
Dere11g0024 524 CDD Bromodomain 138 234 - -
Dere11g0024 524 SUPERFAMILY Bromodomain 124 245 IPR036427 GO:0005515
Dere11g0024 524 MobiDBLite consensus disorder prediction 274 296 - -
Dere11g0024 524 MobiDBLite consensus disorder prediction 93 118 - -
Dere11g0024 524 ProSiteProfiles Bromodomain profile. 150 220 IPR001487 GO:0005515
Dere11g0024 524 Pfam Bromodomain 145 224 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0024 Dere-ChrDere11 304951 308919 Dispersed/Transposed