Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g2029 ATGGCCGATATGACAGCAGACATGGAACTACCAGGCTTTCGATTTCACCCAACCGAGGAAGAGCTCCTTGATTTCTATCTTAAAAACATGATCGTTGGCAAGAAATTGCGGTTCGACATCATTGGTTTCCTTAACATCTATCACCACGATCCTTGGGACTTGCCCGGTCTAGCAAAGGTGGGAGAAAGAGAATGGTACTTCTTCGTGCCAAGAGACAAGAAGCATGGGAGTGGGGGAAGGCCGAACCGTACCACCCAAAGAGGGTTTTGGAAAGCCACGGGTTCGGACCGCAAAATCATAAGCTTGTCGGAGCCAAAGCGAGTGATCGGGTTGAGGAAGACCCTGGTTTTCTACGAGGGCAGAGCTCCCCGGGGCACCAAGACCGATTGGGTTATGAATGAGTACCGCTTGCCAGACACTCTCCCATTCCCCAAGGAGATAGTGTTGTGCAAGATATACAGAAAGGCAACTTCGTTGAAAGTGTTGGAGCAAAGGGCGGCAATGGAAGAAGAAATGAAGCAGCAGTTGGGAAATATTTCGCCTTGCAGCTCCTCGGACACAATGGAAGATCAAAAACAAGTGGTTCCCAAGAAAGAAGTGGAGGATGGAATATTGGTGTCACATAATGAAGACCGCCAAACCACGTTAATTCAAGGCAAGGAGAAGCTTGGGGAGCTGCAACTACCCATACTTAACATGGACTGGAACCAAGACCCCTTCTGGGCTCCAATTAACAGTCCTTGGTTATCCAATTTCGCTACCAACATCTTAAATTTTTAA 780 0.4795 MADMTADMELPGFRFHPTEEELLDFYLKNMIVGKKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTQRGFWKATGSDRKIISLSEPKRVIGLRKTLVFYEGRAPRGTKTDWVMNEYRLPDTLPFPKEIVLCKIYRKATSLKVLEQRAAMEEEMKQQLGNISPCSSSDTMEDQKQVVPKKEVEDGILVSHNEDRQTTLIQGKEKLGELQLPILNMDWNQDPFWAPINSPWLSNFATNILNF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g2029 259 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Dere10g2029 259 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 192 - -
Dere10g2029 259 SUPERFAMILY NAC domain 10 155 IPR036093 GO:0003677|GO:0006355
Dere10g2029 259 FunFam NAC domain-containing protein 67-like 18 159 - -
Dere10g2029 259 ProSiteProfiles NAC domain profile. 9 155 IPR003441 GO:0003677|GO:0006355
Dere10g2029 259 Gene3D NAC domain 18 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g2029 Dere-ChrDere10 33935736 33936722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g2029 4 259 NAC Transcription Factor Family AT2G17040 57.801 1.45e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere10g2029 NAM 1.6e-34 No_clan