Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g2024 ATGATCAGCGCAAAAAGGCTCGTAGATATGGCAAGGAAGTGGCAGAAAATGGCAGGAGGTAAGCGGAAGAGAATCTCGTACCCAAGAGGGGAAATGGATATGTATTCTTCAGCAGCAAATAAGGGCCACTTCGTAGTTTACAGTATGGACCAGAAGCGATTTGTGGTTCCGCTCAAGTATCTGAACAACAACGTCTTCAGGGAGCTGCTCAAATGGTCGGAGGAAGAGTTTGGACTAGATTCCAATGGACCTATTATGTTCCCTTGTGATGGCGTCTTCTTGGAGTATGCAATCTCGTTAGTAGGAGAAAGCGTCCCAGAAGACGTAGAGAAGGCTTTAATCACTTCAATGGCTACATGTCACGGCCTAGCATCATCTTCTCTTGCTCTAACTCAAACCCACCAGCAAACCATAATCCGTGGCTATTAA 429 0.4592 MISAKRLVDMARKWQKMAGGKRKRISYPRGEMDMYSSAANKGHFVVYSMDQKRFVVPLKYLNNNVFRELLKWSEEEFGLDSNGPIMFPCDGVFLEYAISLVGESVPEDVEKALITSMATCHGLASSSLALTQTHQQTIIRGY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g2024 142 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
Dere10g2024 142 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g2024 Dere-ChrDere10 33885999 33886427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g2024 3 101 Calmodulin-binding Proteins AT4G34750 33.000 2.61e-11 56.2