Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g2000 ATGCTTTCATACACGCTTGACCTTCTTCTTCTTTCCAGATCATCCTCTTCTTCAACTTGGTCATTCAATAGCCTGCAATCAATAGTCAAATCGTTGGCGGATCGTCATTATTGTGGTGAAAAGTTCAGGGCTATATCAATCGTGACTGAAAATTCTGATAAGTTGATGAACTTTTTAAGGGCCTGCTTTCGGCCTGGTTCGGATAGATACTCACGAACAGGCTCCGATAGTGGAGGTAGACAAGATGGACTCCTATGGTACAAGGACTCGGGGCAGCATTTGAATGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGCTTGAATCTGGAAGTTTGAGCTCCCATGAATCTGGCCCTTGTGGTACCTTTGTTGGTGTCTATGATGGCCATGGAGGCCCCGAGACATCGCGGTTTATCAATGATCACCTATTTCACCATCTCAAGAGGTTTGCCGCAGAGCAACAATCAATGTCAGTAGATGTAATTCGCAAGGCATTTCAAGCAACAGAAGAGGGATTTATGTCTCTTGTTGCCAAACAGTGGCAAATGAAACCACAAATTGCAGCAGTTGGGTCATGCTGTCTTGTCAGTGTTATTTGTAATGGAAGCATTTATGTAGCAAATCTTGGTGATTCCCGTGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGGGAAGTTCTAGCCATGCAATTGTCCACAGAGCACAATGCAGCAATAGAGTCTGTTAGACAGGAGCTGCATTCTATGCATCCTGATGATTCACAGATTGTTGTTTTAAAGCATAATGTATGGCGAGTGAAGGGCCTTATACAGGTTTCTAGATCTATTGGGGATGTATATTTGAAGAAGGCTGAGTTCAACAGAGAACCTCTATATCCCAAATTTCGACTTCGTGAGCCATTCAAGAGGCCAATACTGAGCTCAGAACCGTCAATATCAGTGTGTCAAGTGCAGCCACATGATCAGTTTGTTATATTTGCATCTGATGGACTCTGGGAGCACCTTAGTAATCAAGAAGCAGTTGGTATAGTTCAAAATAATCCCCGCAGCGGAAGTGCGAGGAGGCTGGTGAAAACAGCCCTTCAAGAAGCGGCAAAGAAGAGAGAGATGAGATATTCAGACCTAAAGAAAATTGATCGTGGGGTTCGTCGACATTTCCACGATGATATCACTGTAATCGTGGTGTTTCTTGACTCAAATCTTGTGAGTAGGGCAAGCTCTGTGAAGTTCAGTAATATATCAGTTAGAGGGGGTGGTATAACCCTTCCTCCTAACACACTGGCACCTTGCACGACACCAACTGAAGGAGGTGGTACCTGA 1344 0.4449 MLSYTLDLLLLSRSSSSSTWSFNSLQSIVKSLADRHYCGEKFRAISIVTENSDKLMNFLRACFRPGSDRYSRTGSDSGGRQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQLESGSLSSHESGPCGTFVGVYDGHGGPETSRFINDHLFHHLKRFAAEQQSMSVDVIRKAFQATEEGFMSLVAKQWQMKPQIAAVGSCCLVSVICNGSIYVANLGDSRAVLGRVVKATGEVLAMQLSTEHNAAIESVRQELHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYPKFRLREPFKRPILSSEPSISVCQVQPHDQFVIFASDGLWEHLSNQEAVGIVQNNPRSGSARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVKFSNISVRGGGITLPPNTLAPCTTPTEGGGT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g2000 447 CDD PP2Cc 98 405 IPR001932 -
Dere10g2000 447 SMART PP2C_4 89 403 IPR001932 -
Dere10g2000 447 ProSiteProfiles PPM-type phosphatase domain profile. 97 405 IPR001932 -
Dere10g2000 447 Gene3D - 86 415 IPR036457 -
Dere10g2000 447 FunFam Phosphatase 2C family protein 86 415 - -
Dere10g2000 447 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Dere10g2000 447 SUPERFAMILY PP2C-like 109 406 IPR036457 -
Dere10g2000 447 PANTHER PROTEIN PHOSPHATASE 75 403 IPR015655 GO:0004722|GO:0006470
Dere10g2000 447 Pfam Protein phosphatase 2C 128 375 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g2000 Dere-ChrDere10 33676456 33680920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g2000 55 447 PP2C-type Phosphatase Gene Family AT4G38520 75.827 0.0 641