Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1972 ATGGACGACGGTGAGATTGATATCTCAAACCAGGAAGTGTTCTCGAGTCCAAACATGTGCGAACTTCCAAGCAGTTGTTCAATGGACAGTTTCTTTGAAGAACTCCTCAAGGACACACATGCTTGCACTCACACCCACACTTGCAATCGTCCTGGCCCTGATAATTCTCATACCCACACTTGTTACCATGTGCACACTAAACTTGTCCCTGCCCCTGCTGAAGACAAGGCTGGCACTGATGACACTGCAGAGTCTGTGGAAAAAAAGAAGTCAAAAAAACGTCCTCTAGGTAACCGTGAAGCAGTTCGCAAGTATCGTGAGAAAAAGAAAGCCCGGGCTGCATCCCTGGAGGATGAGGTTGTGAAGTTGAGGACTTTGAATCAACATTTGATGAAAAGGTTGCAAGGTCAGGCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTACTTGTGGACATTCGAGGAAGGATTGAAGGGGAGATTGGTTCATTTCCATATCAAAAATTGCCTAATTCAAACCCACGTCCAAGCTTGCCTGGTTCTTATGTGATGAATCCTTGTAACATGCAGTGTGATGATTTGGTCTATTGCCTTCATCCAGGAGCAGACGGAGAGACAACAGAAGGTGCATTGCTAAATGGGCAAGGAATTAATGGTTGTGAATTTGAGAGTCTCCAGTGCCTAGCAAGCCATAATGTGGGGCTTAAGGATATTCCTGGTTGTGGAGATGGACTGACAGTGCCTAATGTCAATTCTTCTTCTGCAAATAAGAGAAAAGGGGGAACTCGTGCCGCAACAGCTGGTTGA 810 0.4568 MDDGEIDISNQEVFSSPNMCELPSSCSMDSFFEELLKDTHACTHTHTCNRPGPDNSHTHTCYHVHTKLVPAPAEDKAGTDDTAESVEKKKSKKRPLGNREAVRKYREKKKARAASLEDEVVKLRTLNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKLPNSNPRPSLPGSYVMNPCNMQCDDLVYCLHPGADGETTEGALLNGQGINGCEFESLQCLASHNVGLKDIPGCGDGLTVPNVNSSSANKRKGGTRAATAG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1972 269 Gene3D - 76 154 - -
Dere10g1972 269 Pfam Basic region leucine zipper 89 143 IPR004827 GO:0003700|GO:0006355
Dere10g1972 269 MobiDBLite consensus disorder prediction 72 100 - -
Dere10g1972 269 SMART brlzneu 86 153 IPR004827 GO:0003700|GO:0006355
Dere10g1972 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 135 IPR004827 GO:0003700|GO:0006355
Dere10g1972 269 MobiDBLite consensus disorder prediction 77 100 - -
Dere10g1972 269 Coils Coil 99 133 - -
Dere10g1972 269 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 166 IPR031106 GO:0003700|GO:0006351
Dere10g1972 269 SUPERFAMILY Leucine zipper domain 90 136 IPR046347 GO:0003700|GO:0006355
Dere10g1972 269 CDD bZIP 94 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1972 Dere-ChrDere10 33462800 33464503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1972 1 268 bZIP Transcription Factor Family AT2G16770 63.569 1.01e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere10g1972 bZIP_2 1.2e-12 CL0018