Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1960 ATGGCTAAGTTTCTGCTCACTCCTTTTCCACCACTTTTCTGCTTCGTCCTCTTTTCCTTCGTTTTCTCTGGTTTAATCTCCCTTAGTTCTGCTCTTTCCACTCCTCAAGCTTCCAAGACCTTCATCTTTCGGGTTGATTCTGAATCCAAGCCCTCTATTTTCCCCACCCACTACCACTGGTATACCTCCGAGTTCGCTGAACCAACTCACATCCTTCATGTTTACGACACTGTTTTCCATGGCTTCTCTGCCGTGCTCACTCAGCAACAGGTTGATTCTATAAGCCAGCACCCCTCTGTTCTTGCTGTCTTCGAGGACCGTTGCCGTCAGCTTCACACCACTCGTTCCCCTCAGTTTCTGGGCCTCAGAAACCAGCGTGGTCTCTGGTCGGAATCTGACTATGGGTCTGACGTAATCATCGGAGTTTTCGATACCGGGATTTGGCCTGAACGCCGTAGTTTCTCCGATTTGAATTTGGGTCCTATTCCACGCCGCTGGAAAGGCGTTTGCGAGACGGGGGTGAGATTTACTGCTAGCAACTGCAATAAGAAGCTTATTGGTGCTAGATATTTCTCCAAAGGCCACGAGGCGGGTGCGACTTCCTCCGGTCCGTTAAACCCCATCAACGAAACCATCGAATTCCGTTCTCCTCGAGATGCCGATGGTCATGGGACCCACACAGCGTCGACTGCTGCGGGTCGGTATGCTTTTCGAGCAAGCATGTCTGGTTATGCTTCTGGAATTGCGAAAGGTGTGGCTCCGAAAGCCAGATTAGCGGTTTACAAGGTGTGCTGGAAGAATTCAGGTTGCTTCGATTCTGATATCCTGGCTGCTTTCGACGCCGCCGTAGCCGACGGCGTCGATGTCATTTCTATATCAATCGGGGGCGGTGATGGTGTGGCGTCGCCGTACTATCTCGACCCCATTGCAATTGGGTCATACGGTGCCGTTTCTAGAGGGGTTTTTGTTTCGTCTTCTGCTGGTAACGATGGGCCCGGTGGAATGTCAGTGACGAACTTGGCCCCGTGGTTGACGACAGTTGGTGCAGGCACCATTGATAGGGATTTCCCTGCGCAGGTGATTCTCGGCGATGGTCGGAGACTTTCCGGCGTGTCTCTTTACTCTGGAGCGCCATTGAAGGGAAAAATGTATCAACTTGTTTACCCTGGTAAATCAGGGGTTTTGGCTGATTCACTGTGCATGGAAAATTCCCTTGACCCCAACGTTGTCAAGGGGAAGATTGTTATATGTGATCGCGGAAGTAGTCCCAGAGTTGCTAAAGGTTTGGTGGTGAAGAAAGCTGGTGGTGTGGGAATGATTCTAGCTAATGGTCTTTCTAACGGTGAAGGTCTTGTCGGCGATGCACATCTTCTTCCTGCTTGCGCTGTTGGTGCGGATGAAGGAGATGTCATCAAGGCATATATATCATCTTCTGCAAATCCCACAGCCACCATTGATTTCAAAGGCACTGTGCTTGGAATCAAACCAGCACCAGTGTTGGCTTCCTTCTCAGCCAGAGGACCAAATGGGTTAAACCCAGAGATACTCAAACCAGATCTGATCGCACCAGGAGTGAACATTCTTGCCGCTTGGACCGATGCAGTTGGTCCTACTGGATTAGATTCGGATTCGCGAAGAACTGAATTCAACATCTTGTCTGGTACTTCAATGGCTTGTCCTCACGTAAGTGGTGCAGCGGCGTTGTTAAAATCTGCACATCCAGATTGGAGCCCAGCTGCCATAAGGTCGGCCATGATGACGACTGCGACTCTACTGGATAACAGAAACCAGATCATGATCGACGAAGCCACTGGGAAAGCTTCCACACCGTATGATTTTGGTGCTGGACATCTCAATCTGGGTCAGGCCATCGATCCTGGATTGGTATACGATATTACCAACAACGATTACGTAAACTTTTTATGCGCCATCGGTTATGGTCCGAAGCTAATTCAGGTGATTACTCGTTCACCGTCGAGTTGTCCGGCGAGGAAGCCATTGCCGGAGAATCTAAACTACCCATCTATTGTGGCTCTGTTCCCGAGCTCATCAAAAGGGGTATCGAGTAAGACATTTATCCGGACCGTGACGAACGTGGGTCCGGCGAACTCGATTTACCGGGTGAAAGTGGAGTCGCAGCCGAAGGGGGTGACGGTGAGCGTGAGGCCGTCGCAGCTTGCGTTCTCAGGGTCAGTGAAGAAGAGGAGCTATGTGGTGACGGTGACAGCAGATGGGCGGAACCTGATGCTAGGTCAAGTCGGGGCGGTGTTCGGGTCTATTTCATGGACGGACGGAAAACATGTAGTTCGGAGCCCCATTGTGGTTACTCAAATAGAACCTATGTAA 2346 0.5064 MAKFLLTPFPPLFCFVLFSFVFSGLISLSSALSTPQASKTFIFRVDSESKPSIFPTHYHWYTSEFAEPTHILHVYDTVFHGFSAVLTQQQVDSISQHPSVLAVFEDRCRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNLGPIPRRWKGVCETGVRFTASNCNKKLIGARYFSKGHEAGATSSGPLNPINETIEFRSPRDADGHGTHTASTAAGRYAFRASMSGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVADGVDVISISIGGGDGVASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPGGMSVTNLAPWLTTVGAGTIDRDFPAQVILGDGRRLSGVSLYSGAPLKGKMYQLVYPGKSGVLADSLCMENSLDPNVVKGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGLSNGEGLVGDAHLLPACAVGADEGDVIKAYISSSANPTATIDFKGTVLGIKPAPVLASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDSDSRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATLLDNRNQIMIDEATGKASTPYDFGAGHLNLGQAIDPGLVYDITNNDYVNFLCAIGYGPKLIQVITRSPSSCPARKPLPENLNYPSIVALFPSSSKGVSSKTFIRTVTNVGPANSIYRVKVESQPKGVTVSVRPSQLAFSGSVKKRSYVVTVTADGRNLMLGQVGAVFGSISWTDGKHVVRSPIVVTQIEPM 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1960 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 112 IPR037045 -
Dere10g1960 781 SUPERFAMILY Subtilisin-like 111 628 IPR036852 GO:0004252|GO:0006508
Dere10g1960 781 Gene3D - 641 778 - -
Dere10g1960 781 CDD PA_subtilisin_like 360 485 - -
Dere10g1960 781 SUPERFAMILY PA domain 409 478 IPR046450 -
Dere10g1960 781 CDD Peptidases_S8_3 110 590 IPR034197 -
Dere10g1960 781 Pfam PA domain 385 469 IPR003137 -
Dere10g1960 781 FunFam subtilisin-like protease SBT1.5 353 492 - -
Dere10g1960 781 FunFam Subtilisin-like protease SBT1.5 137 366 - -
Dere10g1960 781 ProSiteProfiles Serine proteases, subtilase domain profile. 110 624 - -
Dere10g1960 781 Pfam Fibronectin type-III domain 670 775 IPR041469 -
Dere10g1960 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Dere10g1960 781 Gene3D Peptidase S8/S53 domain 137 637 IPR036852 GO:0004252|GO:0006508
Dere10g1960 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 67 775 IPR045051 -
Dere10g1960 781 FunFam Subtilisin-like protease SBT1.5 641 778 - -
Dere10g1960 781 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Dere10g1960 781 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Dere10g1960 781 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Dere10g1960 781 Gene3D - 353 492 - -
Dere10g1960 781 Pfam Subtilase family 135 601 IPR000209 GO:0006508|GO:0008236
Dere10g1960 781 Pfam Peptidase inhibitor I9 54 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1960 Dere-ChrDere10 33343279 33345624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1960 12 781 Subtilisin-like Serine Gene Family AT4G34980 73.964 0.0 1201