Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1955 ATGGGCTTCTTCCGGATCTCCTCTGTTTCCGGCTCCCCGGCCGGCAAATGGCTGGGCTTCGTCACCGCCGTCTGGATTCAAGCTATTTCCGGCAACAACTACACCTTCTCCAATTACTCCGACGCCCTCAAATCCCTCATGCATCTCACCCAGGTTGAGCTCAACGGTCTCTCCGTCGCTAAAGATGTTGGCAAGGCCTTTGGGCTTCTCGCCGGCCTCGCTTCTGATCGTTTGCCCACATGGGCCATTCTCCTCATCGGCTCCGTCGAAGGTCTCATTGGCTATGGCGTACAGTGGCTGGTCGTTAGTCAACGAATCCAACCACTTCCTTACTGGCAGATGTGCGTATTTTTGTGTATGGGAGGGAACAGCACGACGTGGATGAACACGGCGGTGTTAGTGACGTCTATACGAAACTTTAGGAAAAACAGAGGACCAGTTTCCGGCATCCTGAAAGGGTTTATTGGACTAAGCACTGCCATATTCACCGACCTCTGTTCTGCTCTGTTCCAAGACGATCCCGCTTACTTCCTCATTATGCTCGCGGTAATCCCGTTCGCCGTTTGCCTCACCGGAATCTTTTTCCTCCGCGAGGTTCCCCCTGCTTCCACCGCCGCCGAGCATGAAGAAGAATCCAATTATTTCGGTATACTCAACGCCGTCGCAGTCGTCATCGCCGTTTATCTCTTAGCTTACGGATTCGTACCCAATCCCGGCATGCTGGCGTCTCGACTGTTCGCCGGCGGTTTACTAGTTCTGTTGGCATCGCCGTTGGGAGTCCCGGTGCACTCTTACTTCAAAGGTTTCAAATCAAATAAGTTCAAACCGGTTCTGGATATCGAGGAACAGGGGACCGAACCGTTGCTTCGAAATGAGAAGTTGAGAGAAGAGACGGCAGCTGTGGCGGCGGAGGCGGCGGCTGCAGAGGCGTCAGAGGCGGTGGTGATAGTGAAGAGAAGGCCGGTGGTGGGAGATGAACTCACGATAATGGAGGCGTTAAGTACGATTGATTTTTGGATATTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACGGGTCTGGCAGTGATGAACAATATGGGTCAAATCGGGTTGGCCCTTGGATACTCCGACGTCTCCATCTTTGTATCTCTCACCAGTATTTGGGGCTTTTTCGGGCGCATCATCTCGGGTTCGGTTTCCGAGCACTTCATCAAGAAAGCTGGAACACCAAGACCTCTTTGGAATGCAGCTTCTCAGATTCTGATGGGTGTAGGATACATACTTCTGGCCATGGCCATGCCTGGTTCTCTCTATATTGGCTCTATAGTAGTTGGCGTGTGCTATGGAGTTCGTCTAGCCATTACAGTCCCAACAGCCTCTGAGCTATTTGGACTCAAATACTATGGTCTTATCTACAACATTCTGATCCTCAATCTTCCCCTCGGTTCCTTCCTCTTCTCTGGCCTGCTCGCCGGAATTTTATACGACACGGAGGCAACTGCCACAGCAGGAGGCGGCAACACTTGTGTCGGAGCCCATTGTTACAGGCTAGTCTTTATAATCATGGCCGCTGCATGCATTGTTGGGTTCTTATTAGACATTTTATTGTCAGTCAGAACCAAGAATGTTTACAGAAAGATTGCCATGAACAAAAATATAAAATAG 1644 0.5085 MGFFRISSVSGSPAGKWLGFVTAVWIQAISGNNYTFSNYSDALKSLMHLTQVELNGLSVAKDVGKAFGLLAGLASDRLPTWAILLIGSVEGLIGYGVQWLVVSQRIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTSIRNFRKNRGPVSGILKGFIGLSTAIFTDLCSALFQDDPAYFLIMLAVIPFAVCLTGIFFLREVPPASTAAEHEEESNYFGILNAVAVVIAVYLLAYGFVPNPGMLASRLFAGGLLVLLASPLGVPVHSYFKGFKSNKFKPVLDIEEQGTEPLLRNEKLREETAAVAAEAAAAEASEAVVIVKRRPVVGDELTIMEALSTIDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSIFVSLTSIWGFFGRIISGSVSEHFIKKAGTPRPLWNAASQILMGVGYILLAMAMPGSLYIGSIVVGVCYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDTEATATAGGGNTCVGAHCYRLVFIIMAAACIVGFLLDILLSVRTKNVYRKIAMNKNIK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1955 547 Coils Coil 291 311 - -
Dere10g1955 547 Gene3D MFS general substrate transporter like domains 330 537 IPR036259 -
Dere10g1955 547 Gene3D MFS general substrate transporter like domains 16 214 IPR036259 -
Dere10g1955 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 538 - -
Dere10g1955 547 CDD MFS_Mch1p_like 15 522 - -
Dere10g1955 547 Pfam Nodulin-like 16 262 IPR010658 -
Dere10g1955 547 SUPERFAMILY MFS general substrate transporter 48 536 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1955 Dere-ChrDere10 33277884 33281758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1955 1 547 Nodulin-like Gene Family AT4G34950 70.567 0.0 783