Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1941 ATGTGGCAGCTGGATCCCATCCATTTTCAAGAAGTGGTGCATTTACTGTTTGGATTACGTAGCTTGTCACTGATCGTGGGACATAGATCTGTGCTTCCAGGGATTGCGTTTTATGACTCTATTGCTGCTTTCGTTCAAAGCCAATTCGATGCTAATTTTGATGGTTCATACTATTATGTCCCACAGATATATTCGTTCTCGCACGCCTGTTTTGCTGCCAACAAACGCAATCTCGTGCGAGAGATAGAGGAGAGCGACCAAAAGTTTCAGAGAGCGAGGGAGAGGCATAGCATAGCAATGGCGGCTTCTGTATCTGCCTGGTCTAAACCTGGCGCATGGGCGCTTGATTCTGAAGAACACGAAGCGGAGCTGCTTGAACAGAAAGACAAGGATGACACTTCCCAGTTTCCTTCTCTTGCCGTCGCCGCTGCCACCAAGCCCAAGAAGAAGAAAGGTCAAACCGTCTCCTTGGCCGATTTCACTGCTTTCGGAGGCCCTAAACCGTCGCAGGCCACACATTCGGATACCTTGACGCATGAAGATCTCATGATGCTGCCAACGGGTCCTCGCCAGCGAACCGCCGAGGAACTTGAGCGCGACCGGAGTCGACTTGGGGGTGGTTTTAGGTCCTATGGTTCGTATGACAGGCCCAATAGGAATTCTGGCGGGGACGAGTCGTCCAATTCTCGGTGGGGTTCATCTAGGGTTTCTGATGAGCCGAGGAGAAATGGTTCCTTCGGTAGGGATTCGAATCGAGAAATTGCACCTTCGAGAGCTGACGAAATAGATAATTGGGCTGCTGCGAAGAAATCAACTGTTGGGAACGGTTTTGAGAGGAGGGAAAGGGATAGAGGAGGCTTTTTTGATTCACAATCGAGAGCTGACGAATCGGACAGTTGGGTATCCAATAAAAGTTATGTGCCATCAGAGGGACGGAGATTTGGTTCGAATGGTGGTGGGTTTGACAGAGAGAGGAAGGTTGGATTTGGTTCGAGCGGCGGCGCAGATTCAGATAATTGGAACAGGAAGAAAGGGGAATTTAACGTTGGAGGTGGAAATGACAGAATTGAGGCTCCGAGTGGGCGACCAAGACTTAATCTGCAACCTCGGTCCCGGCCATTGAGTAATGGAAACCAGGAGGATTCTGGGAATGTGGCAAAGCCTAAGGGTCCAAACCCGTTCGGAGACGCAAGGCCAAGGGAACAGGTTTTGGCGGAGAAAGGGCAGGATTGGAAGAAGATTGATGAGCAGCTGGAGACAATGAAGATTAAGGATACAATCGAGAAAAAGGATGGATTTGGGAGGAGGGGCTTCGGATCTGGCAATGGACGTGCTAGTTTGCCAGAAGAACGAACTGAGAGGAGTTGGAGGAAGGCAGAATCTGTTGATAGTCGTCCAGAAAGCGCTGAGAAATCGGATGATGGACATGTTGAAGAAAACTGA 1443 0.4983 MWQLDPIHFQEVVHLLFGLRSLSLIVGHRSVLPGIAFYDSIAAFVQSQFDANFDGSYYYVPQIYSFSHACFAANKRNLVREIEESDQKFQRARERHSIAMAASVSAWSKPGAWALDSEEHEAELLEQKDKDDTSQFPSLAVAAATKPKKKKGQTVSLADFTAFGGPKPSQATHSDTLTHEDLMMLPTGPRQRTAEELERDRSRLGGGFRSYGSYDRPNRNSGGDESSNSRWGSSRVSDEPRRNGSFGRDSNREIAPSRADEIDNWAAAKKSTVGNGFERRERDRGGFFDSQSRADESDSWVSNKSYVPSEGRRFGSNGGGFDRERKVGFGSSGGADSDNWNRKKGEFNVGGGNDRIEAPSGRPRLNLQPRSRPLSNGNQEDSGNVAKPKGPNPFGDARPREQVLAEKGQDWKKIDEQLETMKIKDTIEKKDGFGRRGFGSGNGRASLPEERTERSWRKAESVDSRPESAEKSDDGHVEEN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1941 480 Coils Coil 75 95 - -
Dere10g1941 480 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 100 469 IPR010433 GO:0003743
Dere10g1941 480 MobiDBLite consensus disorder prediction 369 385 - -
Dere10g1941 480 MobiDBLite consensus disorder prediction 160 480 - -
Dere10g1941 480 MobiDBLite consensus disorder prediction 214 234 - -
Dere10g1941 480 MobiDBLite consensus disorder prediction 292 310 - -
Dere10g1941 480 Pfam Plant specific eukaryotic initiation factor 4B 106 422 IPR010433 GO:0003743
Dere10g1941 480 MobiDBLite consensus disorder prediction 447 480 - -
Dere10g1941 480 MobiDBLite consensus disorder prediction 400 435 - -
Dere10g1941 480 MobiDBLite consensus disorder prediction 235 265 - -
Dere10g1941 480 MobiDBLite consensus disorder prediction 274 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1941 Dere-ChrDere10 33188691 33192494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1941 100 464 Eukaryotic Initiation Factors Gene Family AT4G38710 50.620 4.34e-78 249