Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1928 ATGAACAATTCTAATGAATGCTCAAGCTATGAGGAAAGCTGTTTGTTATGCAATTTATGGTTAAAACTTCTTGCTTCTATAGGTGTTCATGATGTTTACAGACAAGAGGTAGCTTTGATAGAGTTGGTAGCAACAACCTCACTAATTCTCACCCTTACCACCTCCATCATTGCATGCTTGGACTTACACAAGGTTGATCCTAAGCTTTTTACTAGAAAACTGGAATATGTACGCCAAATGGATTTAAGTAACTCCAAAGTAGTAGATGAACAATTTCCGAGGAATGCTCCAGGTTATGAGGAAGGCTGTTCGTTGAGCAATTTATGGTTAAAACTTCTTGCCTCCATAGGTATCCATGACATTTACAGACAAGAGGTATGGAGGGCAGCTTTGACAGAGCTACTAGCAACGGCCTTACTGATGTTTACCCTCACCACCTCCATTATTGCATGCTTGGACTCACATGTGGTTGATCCTAAGCTTCTTGTTCCCATTGCAGTATTCACAGTAGCCTTCCTCTTCCTCATGGTCACAGTCCCTCTATCTGGAGGCCACATGAGCCCAGTCTTCACCTTCATCGCTGCTCTGAAGGGCGTAATATCTCTTACTCATGCTCTCATGTACGTACTATCTCAGTGCATGGGCTCCATCATTGGCTTTCTGATCATTAAGAGTGTGATGCTGCACAAACTAGCAGATAGATATTCCTTAGGAGGCTGTGCTATCAGTGGCGTAAAGCAGCAAGATGCTTTGTTAATAGAATTTGTGTGCACTTTTGTGGTACTTTTTGTGGCTGTGACTGTTGCTTTTGACAAGAGAAGGTCCAGAGATTTGGGGTTGCCTATGGTGTGTTTGGTGATTGCAGGAGCCATGGCATTAGCAGTATTTGTGTCTATTACTGTAACTGGGCAGACTGGATATGCTGGAGTGGGCCTGAACCCAGCGAGGTGTTTGGGCCCGGCGTTACTGATGGGTGACCCATTGTGGAATGGACATTGGATTTTCTGGGTTGGGCCCTTTTTGGCCTGCATATTCTATTATGTTGTCTCTGAGAATTTGCCCAAGGAGGCTGCGGTTTAA 1080 0.4417 MNNSNECSSYEESCLLCNLWLKLLASIGVHDVYRQEVALIELVATTSLILTLTTSIIACLDLHKVDPKLFTRKLEYVRQMDLSNSKVVDEQFPRNAPGYEEGCSLSNLWLKLLASIGIHDIYRQEVWRAALTELLATALLMFTLTTSIIACLDSHVVDPKLLVPIAVFTVAFLFLMVTVPLSGGHMSPVFTFIAALKGVISLTHALMYVLSQCMGSIIGFLIIKSVMLHKLADRYSLGGCAISGVKQQDALLIEFVCTFVVLFVAVTVAFDKRRSRDLGLPMVCLVIAGAMALAVFVSITVTGQTGYAGVGLNPARCLGPALLMGDPLWNGHWIFWVGPFLACIFYYVVSENLPKEAAV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1928 359 SUPERFAMILY Aquaporin-like 122 345 IPR023271 -
Dere10g1928 359 PRINTS Major intrinsic protein family signature 204 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 PRINTS Major intrinsic protein family signature 333 353 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 PRINTS Major intrinsic protein family signature 253 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 PRINTS Major intrinsic protein family signature 167 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 PRINTS Major intrinsic protein family signature 294 316 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 Gene3D Glycerol uptake facilitator protein. 115 357 IPR023271 -
Dere10g1928 359 Pfam Major intrinsic protein 124 342 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1928 359 PANTHER AQUAPORIN-LIKE 110 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1928 Dere-ChrDere10 33093449 33100890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1928 127 354 Major Intrinsic Protein MIP AT3G61430 31.557 1.22e-29 113