Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1927 ATGGATTCACCAAACTCTCAAGCTATATCAGATGAACACTGTTCCAGGTCTTTTCAAAACCGTGAGGCGAGTTGTTCGGTGCGAAACAAGTCTTTAGGACCAAAGCTTCTTGTTTCCATTGGTGCTCATGAATTCTTCAGACTAGAGATGTGGAAGGCAGCTTTGACAGAGTTAGTAGCAACAGCTTCCCTAATGTTCACCTTGACGACTTCCATCATTGCTTGCTTGGACTCACACGATACTGATCCTAAGCTTCTTCTTCCTTTCGCAGTATTCATAATAGCCTTCCTCTTCCTCATGGTCACTGTCCCTCTAACTGGGGGCCACATGAGCCCAGTCTTCACCTTCATCGCTGCTCTGAAGGGCCTCATAACCCTTTCTCGTGCTCTCATCTACGTATTCGCACAATGCATTGGCTCCATTATCGGCTTCTTGATCATCAAGAGTGTGATGCTGCAAAAACTTGCAGACACATATTCCTTGGGAGGCTGTGCTATCAGTGGCTTGAAGAAACAAGAAGCTCTGTTATTAGAGTTTTCTTGCACATTTGTGGTTCTGTTTGTGGGTGTGACAGTGGCTTTCGACAAGAAGAGGTCTAAAGACTTTGGCCTGCCAATGGTGTGCATGGTGGTGGCAGCATCCATGGCTGTAGCAGTATTTATGTCTATAACTGTGACTGGGCGGGCCGGGTATGCAGGCGTGGGCTTGAACCCAGCAAGGTGTTTGGGCCCGGCATTACTTCAAGGAGGCCAATTGTGGGATGGACATTGGGTTTTCTGGGTTGGGCCCTTCTTGGCCTGCATAATGTATTATGGTGTGTCTGTGAACTTGCCGAAGGAGTGTTTGGTTTGTACAGAGGGAGAGTGTGATATTTTAAAGCTGGCTGGGCTTGTTTTTGGCAAAACGAGCGGGTAG 915 0.4754 MDSPNSQAISDEHCSRSFQNREASCSVRNKSLGPKLLVSIGAHEFFRLEMWKAALTELVATASLMFTLTTSIIACLDSHDTDPKLLLPFAVFIIAFLFLMVTVPLTGGHMSPVFTFIAALKGLITLSRALIYVFAQCIGSIIGFLIIKSVMLQKLADTYSLGGCAISGLKKQEALLLEFSCTFVVLFVGVTVAFDKKRSKDFGLPMVCMVVAASMAVAVFMSITVTGRAGYAGVGLNPARCLGPALLQGGQLWDGHWVFWVGPFLACIMYYGVSVNLPKECLVCTEGECDILKLAGLVFGKTSG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1927 304 PANTHER AQUAPORIN-LIKE 26 295 - -
Dere10g1927 304 Gene3D Glycerol uptake facilitator protein. 37 280 IPR023271 -
Dere10g1927 304 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 Pfam Major intrinsic protein 47 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere10g1927 304 SUPERFAMILY Aquaporin-like 43 269 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1927 Dere-ChrDere10 33088249 33091126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1927 40 267 Major Intrinsic Protein MIP AT3G53420 28.571 1.81e-24 98.6