Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1920 ATGGCTATTAAGCAGATCCTGCGTCGGTCTCTTTCAAGGGGGAAGGAAGCAACTTCGATGTCCACTAAGGTTCCAAAAGGGAATTTTGCAGTGTACGTAGGAGAAGAGCCAAAGAAGAGGTTTGTGGTGCCTGTATCGTACCTTAATGAACCTGAATTCCAAGAATTGCTAAGTATGGCTGAGGAAGAGTTTGGGTTTGATCATCCAATGGGAGGTCTCACAATTCCATGCAGTGAAGACATCTTCATCAATCTCACTTCTCGCTTGAACGTGAACAGCCAACTGTTTTGCTGTATAATCTCCAAGAGATTTCATGGCCGAATTATTTGTCCTGGTGGGGAAGAAGTACAGTTATGGGATTCATCATCAAAGGGAAGATCACTCAGAACTCAAAGCAAAAGCCTTCACTGA 411 0.438 MAIKQILRRSLSRGKEATSMSTKVPKGNFAVYVGEEPKKRFVVPVSYLNEPEFQELLSMAEEEFGFDHPMGGLTIPCSEDIFINLTSRLNVNSQLFCCIISKRFHGRIICPGGEEVQLWDSSSKGRSLRTQSKSLH 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1920 136 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Dere10g1920 136 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1920 Dere-ChrDere10 32908750 32909366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1920 24 82 Calmodulin-binding Proteins AT5G20810 59.322 1.71e-15 67.8