Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1915 ATGGCCATTAGAAAACCAAACAAGCTCCCCCAAACTGCAGTCCTTAAGCAAATCCTCAAGAGATGTTCGAGCTTAGGAAAGAAACATGGCTATGATGATGATGGCCTCCCTCTTGACGTCCCAAAGGGCCATTTTGCTGTCTACGTTGGTGAGAACAGAAGTAGGTACATTGTCCCAATCTCATTCTTGACACACCCTGAGTTCCAATCCCTCCTAAGGCAAGCTGAAGAGGAATTTGGCTTTGATCACGATATGGGTCTAACTATCCCCTGTGAAGAAGTAGTTTTCAGGTCTCTAACATCAATGCTTAGATGA 315 0.4476 MAIRKPNKLPQTAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1915 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Dere10g1915 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1915 Dere-ChrDere10 32888738 32889052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1915 37 99 Calmodulin-binding Proteins AT3G43120 57.143 9.35e-21 79.7