Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1914 ATGTCGCCGGCGATCGGAAAGTGCCGTTGGATCCGCTACATTGTACGAATCAGGCAAATGCTTCTCCGGTGGCGCAAGAAGGCGCACATGACGGCGGTTCGATCGCCGTTGTCCGATGTGCCTGCCGGACACCTCGCCGTCTGCGTGGGCCCTAGGAGCCGGAGGTTTATCGTGCGCGCGACGTACCTGAACCACCCTATCTTCAGGAAGCTTCTGGTGCAAGCCGAAGAGGAGTACGGCTTCTGCACACAAGGTCCATTGACGATCCCGTGCGACGAGTCGCTCTTCGAAGCGGCCCTGTGCGCCTTGTCCGGATCCAGTTCGGGTCGCACGGCCCGGTTTTTGAGCCTCGAAGATTTGCAGAAGCGTTGCCACCTGGATGTCTTGAGTAATTTTGACGTTGTTGGAGGAGAATCGTGGCCGTTGCTTCACGACGCGGCTATCTGCTGA 450 0.5889 MSPAIGKCRWIRYIVRIRQMLLRWRKKAHMTAVRSPLSDVPAGHLAVCVGPRSRRFIVRATYLNHPIFRKLLVQAEEEYGFCTQGPLTIPCDESLFEAALCALSGSSSGRTARFLSLEDLQKRCHLDVLSNFDVVGGESWPLLHDAAIC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1914 149 Pfam Auxin responsive protein 16 103 IPR003676 GO:0009733
Dere10g1914 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1914 Dere-ChrDere10 32876475 32876924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1914 5 143 Calmodulin-binding Proteins AT4G34750 52.414 1.19e-43 139