Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1909 ATGGGCGACACTGAAGATGCCAATACTGATATGATGCAAAGTCTTCAATCCTCATTCGGAACTTCATCATCTTCGATTCTCAAACAACCTTTAAGTATGGACCAACTGAGTGTACCCCAATTCAATCCCTCACAAATGCGCGCGCGGCACTTTCAGCAGAATTTTGGCGGGGATGGTAATAATAATAAAAGAGTAGGCATACCACCATCACATCCCCACCAGATCCCACCGATTTCGCCATATTCTCAGATCCCTGTGTCGCGACCCACGTCTCAGCAAAATGCTAGCCCAGGACCTACTCACTCGCGATCATTATCTCAGCCACCATTTTTCTCGCTGGATTCTCTGCCTCCCTTAAGTCCTTCTCCATTTCGTGACTCCTCTTCAACTTCCATGTCGGACCCAGCTTCAGCTGATGTGTCTATGGAGGATCGGGATGTAAGTTCGCATTCTTTATTGCCACCTTCACCTTTTACAAGGGGTAATCCTTCACGGGTTGGAGAGAGTTTACCCCCTCGTAAAGCACATAGGCGCTCTAACAGTGATATTCCATTTGGGTTTTCTACTGTAATGCAATCTTCACTTCCCCTTATTCCACTAAGGGGTTCTGGTGGATTAGAGAGGTCATTGTCGGGGAGAGAAAATTCAGGTGTAGGTTTAGCAAAGCCTGCACAATTAGTTAAAAGGGAAGCAAGCTGGGACAGAATAGTTGACCACAATGTTGAGGGATCCGGTGAGAAGAAATCCCCTGATGGGGAAGTTGTGGATGATCTTTTCTCTGCATATATGAACTTGGATAACATTGATGCACTTAACTCTTCAGGGACTGATGATAAAAATGGTAACGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGTGATAGTAGTGATAATGAAGCAGAAAGCAGTGTTAACGAAAGTGGGGGCAACATGCATAGACAGGGGATCAATTCTGCTAGTGAAATGAAGGAAGGGATGAAAAGGAGTGCAGGAGGAGATATTGCACCAACTACAAGACACTACAGAAGTGTCTCAATGGACAGTTTTATTGGGAAGTTGAACTTTAATGATGACTCCCCTAAACTGCCACCTTCACCAGGTACTCGTCCTGGCCAACTCTCTCCCACCAATTCGATTGATGGTAATTCATCTGCCTTCAGCTTGGAGTTTGGAAACGGAGAATTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCTTTAACTGATCCAAAGCGGGCAAAAAGGATTCTGGCAAATAGGCAATCAGCTGCACGTTCCAAAGAACGGAAGATGCGATACATTTCAGAACTAGAACACAAGGTTCAGACTCTACAGACAGAAGCCACCACACTGTCTGCACAGCTTACCCTGCTACAGAGAGATTCTGTGGGCCTCACTACCCAGAATAATGAGTTGAAGTTTCGCCTTCAAGCTATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAAGCACTAACTGCTGAGGTTCAACGACTCAAGCTTGCCACAGCTGAGTTGAATGGCGATGGCTGCATGATCCCACAGCATTCGATCAACCCCCAGATGTTCCAGCAGCAGCGGCAGCAACCAGCGGCATCCCAACTAAACATTCATATGCAGCAGCAGCAGAACAACAGTAATACCACCTCGAAGACCGACTCAAAACAGTAG 1716 0.4569 MGDTEDANTDMMQSLQSSFGTSSSSILKQPLSMDQLSVPQFNPSQMRARHFQQNFGGDGNNNKRVGIPPSHPHQIPPISPYSQIPVSRPTSQQNASPGPTHSRSLSQPPFFSLDSLPPLSPSPFRDSSSTSMSDPASADVSMEDRDVSSHSLLPPSPFTRGNPSRVGESLPPRKAHRRSNSDIPFGFSTVMQSSLPLIPLRGSGGLERSLSGRENSGVGLAKPAQLVKREASWDRIVDHNVEGSGEKKSPDGEVVDDLFSAYMNLDNIDALNSSGTDDKNGNENRDDLDSRASGTKINGGDSSDNEAESSVNESGGNMHRQGINSASEMKEGMKRSAGGDIAPTTRHYRSVSMDSFIGKLNFNDDSPKLPPSPGTRPGQLSPTNSIDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTTQNNELKFRLQAMEQQAKLRDALNEALTAEVQRLKLATAELNGDGCMIPQHSINPQMFQQQRQQPAASQLNIHMQQQQNNSNTTSKTDSKQ 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1909 571 Gene3D - 424 476 - -
Dere10g1909 571 Pfam bZIP transcription factor 425 481 IPR004827 GO:0003700|GO:0006355
Dere10g1909 571 SMART brlzneu 421 485 IPR004827 GO:0003700|GO:0006355
Dere10g1909 571 SUPERFAMILY Leucine zipper domain 425 476 IPR046347 GO:0003700|GO:0006355
Dere10g1909 571 MobiDBLite consensus disorder prediction 295 322 - -
Dere10g1909 571 Coils Coil 441 475 - -
Dere10g1909 571 MobiDBLite consensus disorder prediction 362 392 - -
Dere10g1909 571 FunFam probable transcription factor PosF21 424 477 - -
Dere10g1909 571 MobiDBLite consensus disorder prediction 121 137 - -
Dere10g1909 571 MobiDBLite consensus disorder prediction 84 113 - -
Dere10g1909 571 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 423 486 IPR004827 GO:0003700|GO:0006355
Dere10g1909 571 MobiDBLite consensus disorder prediction 270 322 - -
Dere10g1909 571 MobiDBLite consensus disorder prediction 7 60 - -
Dere10g1909 571 CDD bZIP_plant_RF2 426 475 IPR044759 GO:0003700|GO:0006355
Dere10g1909 571 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 104 568 - -
Dere10g1909 571 MobiDBLite consensus disorder prediction 378 392 - -
Dere10g1909 571 Coils Coil 504 524 - -
Dere10g1909 571 MobiDBLite consensus disorder prediction 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1909 Dere-ChrDere10 32830995 32834292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1909 1 540 bZIP Transcription Factor Family AT4G38900 62.143 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere10g1909 bZIP_1 4e-09 CL0018