Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1868 ATGGCTATCCTCCTGGTCATTTTCTTCTTGTTCTTCTCTCCCACTTCTTTCTCAGCATCCCCATCTTCCACCTTCACTCCTAAAGATGACTTCCTCATCGATTGTGGTTCAGATAACACACCCAACCTCCCAGATGGAAGACAATTCCTATCAGAATCACAAGCCAGTTCATTATTACAAGCCAAAGATGACTATAAAGTCTCAGACAATGACGCCAATGTCCCCTCACCTATTTACTCAAGCGCGAGGATTTTCAAAGATGAAGCTAGATACTCCTTCAAATTGTCTCAACCAGGCTTCCATTGGGTTCGTCTTCATTTCTACCCCTTAAAGAACGATGTCTTTGATCTTCAGCAAGCTACATTCTCTGTAAATACAGAAACCTATGTATTGCTTCATAGCTTCAATGTGAACAATAATAACAACCCCATCCTCAAGGAGTACCTCATAAACGCAACTGAACCACAATTCACTATTTCGTTTCTTCCCCTGAAGAATTCTGCTGCTTTCATCAATGCCATTGAAGTCGTTTCAGCTCCGGACATCTTGATCGCCGACAAAGGCGCCGCCCTATTCCCCGTCGGCGACTTCGACGGCCTGACCTCCCACGCTTTCCAAGCGGTATACCGGCTGACCAACGGTGGACCTCTGATCACCTCCACGAACGACACGCTAGGTAGGGTTTGGGTCTCCAATCAGCCTTTCCTTACCAACAGTAACATGGCGAAGAATGTCTCTGTAGCTCCAAACGCCGTCGCATTCCCTAACAACCCATCGATGTCTCCTCTAATCGCACCGCCAATCGTGTACGCTTCCGCTACCGAAATGGCCGATGACATGAACAACCCTAACTTCAACATCACGTGGAAATTCGACGTGGACAATTCTTTTAGCTACCTCGTTAGATTGCACTTCTGCGACATTGTGTCCAAGAGTCTCAACGAGCTCTACTTCAATGTGTTCGTGAATCAGAAAATGGCGATTTCGAACTTGGATTTGTCCGCCATTACCGGAGCTCTGGCAGTACCTTACTACAAAGACATTGTGGTGGATGCTTCGTTGATGTCTGGAGGCTTAACGGTTCAGATTGGACCAACAAAGTCCCCAAATGCAATAATGAACGGAATCGAGGTGATGAAGATGAGCAATTCTGTGAATAGCTTGGATGGAGAATTTGGGGTTGACGGAAAAAAGGACGGTGATGGGTCTAACCGGAAGACCGTCGCTGCGGTTGGGTTCGCCATGATGTTCGGAGCATTCGCAGGTCTTGGTGCGATGGTCATCAAGTGGCACAAGAGGCCTCAAGATTGGCAGAGAAGGAATAGCTTCTCTTCATGGTTACTTCCTCTCCATGCAGGTGATGGAAGCTTTATAGGTGGCAGCAACAGCAAAAACTCAACAGTGCCTCACTTCAGCTCATCTGCAGGCTTAGGTAGGTATTTCTCCTTAGCAGAGTTACAAGAAGCAACTAAGAATTGGGATCCCAAAACCGTAATTGGTGTTGGCGGATTCGGCAATGTTTATCTCTGTGTGATTGACGGAACTCAAGTAGCTGTTAAAAGAGGAAACCCACAATCAGAGCAAGGAATCACAGAATTCCAGACAGAAATTCAAATATTGTCTAAGCTCAGACACAGACACTTAGTATCCTTAATTGGGTATTGTGACGAAAACGAGGAAATGATCTTGGTTTATGAGTACATGTCCAATGGACCCTTGAGAAATCATTTGTACGGAAAGAACTTGCCACCTCTTTCATGGAAACAAAGGTTGGAAATCTGTATTGGAGCAGCTCGTGGGCTTCACTATCTTCATACTGGTACTGCACAAGGTATAATCCATCGTGATGTTAAGACCACAAACATTTTGCTTGATGATAACTTCACAGCCAAAGTTGCTGATTTTGGGCTTTCCAAGGATGCCCCAATAGGCCAAGGGCATGTCAGTACAGCAGTGAAGGGTAGTTTTGGGTATTTAGACCCAGAGTACTTCAGAATGCAACAACTAACAGAAAAATCTGATGTGTATTCATTTGGGGTAGTCTTATTAGAGGCACTCTGTGCAAGAGCACCCCTTAACCCTCAATTGCCTAGAGAACAAGTAAATTTGGCTGACTGGGCATTGCAGTGGAAGAAAAAGGGCTTAATTGAGAAGATCATAGACCCTACACTTGTAGGGACATGTGACCCAGAATCAATAAAGAAGTTTGCTGAGGCTGCTGAGAAGTGCTTGGCTGATAATGGGGCTGATAGGCCTTCAATGGGAGATGTATTGTGGAATTTAGAGTATGCTTTGCAACTTCAAGAAGCTTTCTTAGAAGGAAAAGTTGAGAACGAGAGTGAGACTAGGCCTCCTCCACCTCCTCCTTCTTCTAATGACCACGACCAACTAGTTTCTCATCAAGAAGCAACTAATAATAATGGCACAGAAGAATTCCAAACTATAACTATTGACGAGCATTCAGGAACAGCAATGTTTGCTCAGTTGTCTAATGTCACTGGTAGGTGA 2508 0.449 MAILLVIFFLFFSPTSFSASPSSTFTPKDDFLIDCGSDNTPNLPDGRQFLSESQASSLLQAKDDYKVSDNDANVPSPIYSSARIFKDEARYSFKLSQPGFHWVRLHFYPLKNDVFDLQQATFSVNTETYVLLHSFNVNNNNNPILKEYLINATEPQFTISFLPLKNSAAFINAIEVVSAPDILIADKGAALFPVGDFDGLTSHAFQAVYRLTNGGPLITSTNDTLGRVWVSNQPFLTNSNMAKNVSVAPNAVAFPNNPSMSPLIAPPIVYASATEMADDMNNPNFNITWKFDVDNSFSYLVRLHFCDIVSKSLNELYFNVFVNQKMAISNLDLSAITGALAVPYYKDIVVDASLMSGGLTVQIGPTKSPNAIMNGIEVMKMSNSVNSLDGEFGVDGKKDGDGSNRKTVAAVGFAMMFGAFAGLGAMVIKWHKRPQDWQRRNSFSSWLLPLHAGDGSFIGGSNSKNSTVPHFSSSAGLGRYFSLAELQEATKNWDPKTVIGVGGFGNVYLCVIDGTQVAVKRGNPQSEQGITEFQTEIQILSKLRHRHLVSLIGYCDENEEMILVYEYMSNGPLRNHLYGKNLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVADFGLSKDAPIGQGHVSTAVKGSFGYLDPEYFRMQQLTEKSDVYSFGVVLLEALCARAPLNPQLPREQVNLADWALQWKKKGLIEKIIDPTLVGTCDPESIKKFAEAAEKCLADNGADRPSMGDVLWNLEYALQLQEAFLEGKVENESETRPPPPPPSSNDHDQLVSHQEATNNNGTEEFQTITIDEHSGTAMFAQLSNVTGR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1868 835 PANTHER OS07G0166700 PROTEIN 479 768 IPR045272 GO:0004714|GO:0006468
Dere10g1868 835 ProSiteProfiles Protein kinase domain profile. 493 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1868 835 CDD STKc_IRAK 499 762 - -
Dere10g1868 835 Gene3D Transferase(Phosphotransferase) domain 1 568 781 - -
Dere10g1868 835 FunFam receptor-like protein kinase FERONIA 458 567 - -
Dere10g1868 835 FunFam Putative receptor-like protein kinase 30 180 - -
Dere10g1868 835 MobiDBLite consensus disorder prediction 775 798 - -
Dere10g1868 835 SMART serkin_6 493 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1868 835 Gene3D Phosphorylase Kinase; domain 1 478 567 - -
Dere10g1868 835 Pfam Malectin-like domain 33 381 IPR024788 -
Dere10g1868 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Dere10g1868 835 FunFam Receptor-like protein kinase FERONIA 568 782 - -
Dere10g1868 835 SUPERFAMILY Protein kinase-like (PK-like) 468 762 IPR011009 -
Dere10g1868 835 Gene3D - 31 180 - -
Dere10g1868 835 Gene3D - 204 383 - -
Dere10g1868 835 FunFam Receptor-like protein kinase FERONIA 204 383 - -
Dere10g1868 835 Pfam Protein tyrosine and serine/threonine kinase 497 758 IPR001245 GO:0004672|GO:0006468
Dere10g1868 835 ProSitePatterns Protein kinases ATP-binding region signature. 499 520 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1868 Dere-ChrDere10 32386365 32390176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1868 25 835 Receptor kinase-like Gene Family AT4G39110 65.588 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere10g1868 Malectin_like 8.4e-39 CL0202