Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1860 ATGGCTTCCTCAAGTGGAACATCTTCTGGGTCATCATCTCTGGCCCAAAACTCTGGTTCAGAGGAGGATTTGCAGGCTTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAATCGTGAATCGGCGAGAAGATCAAGAATGAGGAAACAGAAGCATCTGGATGATCTGGTGGCTCAAGTGGCTCAGCTCAGGAAGGAGAATCAGCAGATTCTCACGAGTGTCAATTTCACAACCCAACAATATCTGACCGTTGAGGCTGAGAATTCTGTACTCAGAGCTCAAGTAAATGAGCTGAACCACAGATTGCAATCTCTGAACGAGATTGTGGATTTCTTGAATGCAAATTCTGGGGTTTATGGAGCTTCAAACTCAAGCACCTTCATTGAGCCCACCAATAGCTTCTTCAATAACCCATTAAACATGGCTTACCTGAACCAGCCAATCATGGCTTCTGCAGACATGTTTGAGTGCTGA 477 0.4528 MASSSGTSSGSSSLAQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRKENQQILTSVNFTTQQYLTVEAENSVLRAQVNELNHRLQSLNEIVDFLNANSGVYGASNSSTFIEPTNSFFNNPLNMAYLNQPIMASADMFEC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1860 158 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Dere10g1860 158 MobiDBLite consensus disorder prediction 1 52 - -
Dere10g1860 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Dere10g1860 158 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Dere10g1860 158 Coils Coil 47 74 - -
Dere10g1860 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 154 - -
Dere10g1860 158 MobiDBLite consensus disorder prediction 1 24 - -
Dere10g1860 158 Gene3D - 29 83 - -
Dere10g1860 158 Pfam bZIP transcription factor 31 74 IPR004827 GO:0003700|GO:0006355
Dere10g1860 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Dere10g1860 158 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Dere10g1860 158 Coils Coil 89 116 - -
Dere10g1860 158 MobiDBLite consensus disorder prediction 25 52 - -
Dere10g1860 158 FunFam BZIP transcription factor 29 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1860 Dere-ChrDere10 32327656 32328132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1860 25 154 bZIP Transcription Factor Family AT4G34590 61.765 2.83e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere10g1860 bZIP_1 3e-10 CL0018