Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1847 ATGACACCAGAGAGAGAAATATTCAAGATTGTGTCTATGTATCTATCTGCTCCATTGGCTTCGTCGTCTGCATTGCCGGTGACCGCTACTACTGTGAGCAGCAGAAGCCATCACCATGAAGGATGTAATCTATATCAAGGTCTCCTATCGCTTCCATCTGTCCTCGCTAATTCTGCTGCTCTCGCCGCCGAAGACAGCTTCCCTTCCCGGTCCGAACCGCTTCGATGTTTGGTCGCTTTTCGCTTGCAGGCTCCAAAGAAGGATAAGGGTCCTCCACCTTCTTCCAAACCCGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTTAATAACATGGTGCTTTTCGATCAGGCCACCTATGACAAGCTCCTCTCTGAGGCACCCAAATACAAGCTTATTACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGGGAATTGATGGCGAGAGGCGCAATCAGGATGGTATCTGCGCATGCTAGTCAGCAGATATACACCAGGGCTACAAACACCTAG 573 0.4904 MTPEREIFKIVSMYLSAPLASSSALPVTATTVSSRSHHHEGCNLYQGLLSLPSVLANSAALAAEDSFPSRSEPLRCLVAFRLQAPKKDKGPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGAIRMVSAHASQQIYTRATNT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1847 190 PANTHER 40S RIBOSOMAL PROTEIN S25 84 190 IPR004977 -
Dere10g1847 190 Gene3D - 103 190 - -
Dere10g1847 190 FunFam 40S ribosomal protein S25 103 190 - -
Dere10g1847 190 Pfam S25 ribosomal protein 93 187 IPR004977 -
Dere10g1847 190 MobiDBLite consensus disorder prediction 85 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1847 Dere-ChrDere10 31620550 31629390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1847 84 189 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 93.396 1.09e-52 162