Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1832 ATGTCTTCTTCATTGTTCAACATATCAGAAATGTATTCATGTCAAAGATATTACCTTTACTCTCCATGCTCTCTCCCTCTCCAATCCTTCTATACCCCGACTTCCACCATTGTCAACTGCCAAAACCCACATGGTCCGGATGCCCAGAACCTCAATCTCCGCATGCAGAACTCCAAATCTACCGCCTTTCTCCTTCGCCAACTTTCTGATGAGAAAGAAAACCATTATCTCCAGCAATTCGATCCCAAACCCAGAGACATGCAACACGATATGCCCGATGAAGAAAAGATTAAGCTTTTGGAGCTTTCCCTTGTGAGGAAAAGAACCCCTCAGTTTCCTGGGTCCATCTATGTTCAATCTCCTAGTGATCCTGATGTGGGTTCTTCTTTGCCGCCTCTGCGAACTCTTTTTAGAGAAAAAGTTGAAGGTGAAGGTGAAGGTGAAGACGAGGAGGAGATGATAATGCGTGCGATTGAGATTCGAAGGAAGGTGACGAAAGAGATTTTCATGGAAGCGATGAGAAAGGGCAAGTTTGGAATGACGTACGCTACCAATTTGGTGAATAGATTGACTGTTTTTATCGATTATGTTATGATTGAAGCTGCTTCCATGAAAAGATTGCCTGAATATTCGCATTCTACGTTCAATTTACGCGCCAAAACTGTTATACAGGACTCTCAAGTTGTGCCTCTAATCAGATGGTTGAAGCATAATTCACTGTCATATCATCGGATATCAAAGCTCATTTTGATGTCAAGAGGAAACCTTGAGTCTATAAGACGTCTTGCTGAGTGGTTGAAGTCAATACATGTGAGAGGAGAATTTGTTGGGGTTGCACTAGTGAATGCTGGAGACAATATTCTGGAACGCAGCAATGAGGAACTGGATGAGATTGTTGAGTATCTAGAGAGCACGGGAGTCAGGAGGGATTGGATGGGTTATGTCATGAGCCGATGTCCTCAGTTGTTATCTTACAGCATGGAAGAAGTGAAGACTCGTGTGAATTTCTACATAGATATGGGTTTAGATGAGCATGATTTTGGCACAATGGTTTTTGATTATCCTAAAATTTTAGGTTACTTTTCTCTGGAAGAAATGAATCAAAAGGTCAATTACTTAAAGGAGTTTGGGCTCAACATTGAGGACGTTGGCAGAGTGCTGGCATTCAAGCCACAATTGATGGGTTGTAGCATTGAAGAAGGATGGAAACCTCTTGCCAAGTATTTGTACTATTTTGGGGTTACCCGAGATGGCATGAGGAGAATGCTTACCATTAAACCAATGGTCTTTTGTATTGGTTTGCAGACAAATATTGTGCCTAAGGTAAAGTTTTTTCAGGACATAGGGATTCGAGATGATGCAATTGGCAACATGCTTGTAAAGTTTCCTACTCTACTCACATACAGCCTCAACAAGAAGATTAGGCCAGTGGTCATATTCTTGATGACCAAAGCTGGGGTCAGTGAGAAAGATATTGCCAAGACTGTAGCTCTGGGACCAGAGCTCTTGGGATGCAGCATAGTGCATAAGCTTGAAGTAAATGTAAAATATTATCTGTCACTCGGTATACGTCTGAAGCAATTGGGTGAGATGATTGCTGATTTCCCAATGCTGCTCAGATACAACACAGATGTCCTTCGTCCCAAGTATACTTATTTGCGGAGAACTATGGTCCGGCCTTTGGAAGATCTAATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTCAATGGTCGAATTATTCCAAGGCACAAGGTTCTGGTGGAAAATCAGATTAATCTGAAGCTGCGATACATGTTAGCTTGTTCTGATGTAGAATTCAGAAAATTGGTTGACTCTAAAATTAGAATGCGACAAACATTACCATCTCCAGGCATGAGTGATGATATTACAGACCCCCACACTTGA 1905 0.4173 MSSSLFNISEMYSCQRYYLYSPCSLPLQSFYTPTSTIVNCQNPHGPDAQNLNLRMQNSKSTAFLLRQLSDEKENHYLQQFDPKPRDMQHDMPDEEKIKLLELSLVRKRTPQFPGSIYVQSPSDPDVGSSLPPLRTLFREKVEGEGEGEDEEEMIMRAIEIRRKVTKEIFMEAMRKGKFGMTYATNLVNRLTVFIDYVMIEAASMKRLPEYSHSTFNLRAKTVIQDSQVVPLIRWLKHNSLSYHRISKLILMSRGNLESIRRLAEWLKSIHVRGEFVGVALVNAGDNILERSNEELDEIVEYLESTGVRRDWMGYVMSRCPQLLSYSMEEVKTRVNFYIDMGLDEHDFGTMVFDYPKILGYFSLEEMNQKVNYLKEFGLNIEDVGRVLAFKPQLMGCSIEEGWKPLAKYLYYFGVTRDGMRRMLTIKPMVFCIGLQTNIVPKVKFFQDIGIRDDAIGNMLVKFPTLLTYSLNKKIRPVVIFLMTKAGVSEKDIAKTVALGPELLGCSIVHKLEVNVKYYLSLGIRLKQLGEMIADFPMLLRYNTDVLRPKYTYLRRTMVRPLEDLIEFPRFFSYSLNGRIIPRHKVLVENQINLKLRYMLACSDVEFRKLVDSKIRMRQTLPSPGMSDDITDPHT 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1832 634 Pfam mTERF 406 606 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 Pfam mTERF 256 432 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 PANTHER CGI-12 PROTEIN-RELATED 286 379 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 Gene3D Transcription termination factor 3, mitochondrial 375 613 IPR038538 -
Dere10g1832 634 SMART mt_12 420 451 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 561 592 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 348 379 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 529 559 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 384 415 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 493 524 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 313 343 IPR003690 GO:0003690|GO:0006355
Dere10g1832 634 SMART mt_12 456 488 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1832 Dere-ChrDere10 31423543 31427201 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere10g1832 mTERF 3.8e-45 No_clan