Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1827 ATGGCCTCGGACAACTCCCCCGGTCGCGGTATCCCCGAGCTCTCTAACACTACTCCGTTTCTGGGCTTAAAGCTCTACATCGTGATCGGCATTTTCCTTCTTATCGTGGTAGCGGTTTTGCTTTCGACCTTTCTATGCATTCGCCGGAATCGAACCTCGACGAAGCATAGAATGCGCGTGAAGCACAGTTCCGGAACGATTCCGTTGGTCTCCAAGGAGATCGTGGAAGTTAAAGCTCTGGATCTCGAACAGAATTGTGAACAAACACATATTGAAACCGAAGATCAGGATCCGAAGAAGGAGAAGGTTGAGACTGAGGTTGACAGAAAAGGGAAGAAGAATAGCGAGGGGAGCGACGTGTCCGGTGGGAGCCGCAGTGACGTGTCGGTGGAGGCACCGAACATAGGGTGGGGCCGATGGTATAGCTTGAGGGAGCTGGAGGATGCCACACGTGGGTTTGCGGAAGAGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGAGTTCTTGAAGATGGGTCTGTGGTGGCTGTGAAGAATCTTCTGAACAACAAGGGTCAAGCAGAGAAGGAATTTAAGGTGGAGGTTGAAGCCATCGGAAAAGTAAGGCATAAGAATTTGGTGGGTCTAGTTGGTTATTGTGCGGAAGGTCCTCAGAGGATGCTAGTTTATGAATATGTTGATAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTAGGGCCTGTTAGCCCCTTGACATGGGATCTACGAATGAGGATTGCCATTGGGACAGCAAAAGGGCTAGCCTATCTGCATGAAGGGCTGGAACCCAAGGTTGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAGGTGGAATGCTAAAGTATCAGACTTTGGATTAGCCAAGCTATTAGGCTCTGAGAAGAGCTATGTGACTACTCGTGTAATGGGGACATTTGGATATGTTTCTCCCGAGTATGCAAGCACGGGAATGCTTAATGAGGGAAGTGATGTGTATAGCTTTGGAGTACTACTCATGGAGATAATTACAGGAAGAAGCCCCATTGATTATTCTAGACCACCTGGAGAGATGAATTTGATTGATTGGTTCAAGGGAATGGTAGCAAGTCGTCGTGGTGAAGAGCTAGTAGATCCTCTGATTGAGGTTCAACCCTCCCCAAGATCTTTGAAGCGAGCTTTGCTGGTTTGTCTGCGCTGTATAGATTTGGATGTCAGTAAACGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTCCCCTTCCGTTCTGAACTTCGAACTGTAAGAGAGAAAGAGCCTGTACCTTCTTCACATGCAGCTGTTTCCAGTAAAGTTCCGTATCCACCAAAGCATGTGGAGTCCACAGAACAGTCAAGATGGAGATGA 1416 0.4746 MASDNSPGRGIPELSNTTPFLGLKLYIVIGIFLLIVVAVLLSTFLCIRRNRTSTKHRMRVKHSSGTIPLVSKEIVEVKALDLEQNCEQTHIETEDQDPKKEKVETEVDRKGKKNSEGSDVSGGSRSDVSVEAPNIGWGRWYSLRELEDATRGFAEENVIGEGGYGIVYRGVLEDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDLRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLIDWFKGMVASRRGEELVDPLIEVQPSPRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRTVREKEPVPSSHAAVSSKVPYPPKHVESTEQSRWR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1827 471 MobiDBLite consensus disorder prediction 88 127 - -
Dere10g1827 471 CDD STKc_IRAK 159 425 - -
Dere10g1827 471 Gene3D Transferase(Phosphotransferase) domain 1 229 436 - -
Dere10g1827 471 FunFam Putative receptor-like serine/threonine-protein kinase 229 439 - -
Dere10g1827 471 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Dere10g1827 471 PANTHER OS01G0323000 PROTEIN 13 445 - -
Dere10g1827 471 Gene3D Phosphorylase Kinase; domain 1 126 228 - -
Dere10g1827 471 SMART serkin_6 153 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1827 471 Pfam Protein kinase domain 154 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1827 471 SUPERFAMILY Protein kinase-like (PK-like) 127 425 IPR011009 -
Dere10g1827 471 MobiDBLite consensus disorder prediction 88 116 - -
Dere10g1827 471 MobiDBLite consensus disorder prediction 440 471 - -
Dere10g1827 471 FunFam Probable serine/threonine-protein kinase At1g01540 133 228 - -
Dere10g1827 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Dere10g1827 471 ProSiteProfiles Protein kinase domain profile. 153 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1827 Dere-ChrDere10 31349737 31353218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1827 6 427 Trihelix Transcription Factor Family AT1G70460 40.732 2.49e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere10g1827 Pkinase 1.4e-45 CL0016