Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1810 ATGTCTGTGTCTCTCTTCAGCAAAGAAGCTCCAGATAAACCTTTGCCACCACATCTGTCTACTCCTCCACAGAAATACAGCACACCACTTCAATATGATTCTCAGTGTGATCCCCGAAGTCTCTCTGGTCATCTTGTTGTATCTGAGGGCGCTGCATTGACAATTTCAGAAAGTAGACAAAGTATTTATAGTGCAAAAAAAATGGATTCAATGATATTATGTGATGGGAACTTACAGTCTAGAAGTATCAAATCAAGAGAAAATCGGAATGGATCTTCAATGCCTACTAGTGCAAGAGATGGATCCTTATGGAAGTTGTGTGTGTCATCAGATGAAGGCCATGACAGTGATGATACTAACAATGGTTCTTTAACTACGAAGCAGCAATGTGATGAGGTGCTTGCAAATGGGGATACTGCAGAGAAGGATGTTATTGAAAACTTTAAAACTGATCATGTGAATAGAAATTCTGCATTGGAGGATATTGCGGTCAATTCAACTGAACTAAATGCCAATTTGGGAATGGCCCCCAATATTGGGACTGATCCCCGACTTTCAAAGCTGGAAGAGGATGAAATAAAAAGAGAAAGGAAAAGGCAGTTAAACAGGGAATCGGCTCGAAGATCAAGAATACGCAAGCAGCGAGAACTTGAAGAATTACAAAACACTGTGGGCAATCTTATGAGCGAAAATTCCTTTCTTAAGAATAAGCTAATGAGTCTTTCCGAGGACTGTGTGGAGCTCACCAATTTAAACGACTCCATTGAGAACGAACTCGTTGAGACTTATGGGCCAGAATTCATTGCCGATCTTATAGCCACCAAGCCAGCTTCAATACGTTGCTGA 846 0.409 MSVSLFSKEAPDKPLPPHLSTPPQKYSTPLQYDSQCDPRSLSGHLVVSEGAALTISESRQSIYSAKKMDSMILCDGNLQSRSIKSRENRNGSSMPTSARDGSLWKLCVSSDEGHDSDDTNNGSLTTKQQCDEVLANGDTAEKDVIENFKTDHVNRNSALEDIAVNSTELNANLGMAPNIGTDPRLSKLEEDEIKRERKRQLNRESARRSRIRKQRELEELQNTVGNLMSENSFLKNKLMSLSEDCVELTNLNDSIENELVETYGPEFIADLIATKPASIRC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1810 281 MobiDBLite consensus disorder prediction 82 99 - -
Dere10g1810 281 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 255 IPR004827 GO:0003700|GO:0006355
Dere10g1810 281 Coils Coil 203 258 - -
Dere10g1810 281 CDD bZIP_plant_GBF1 195 245 IPR045314 GO:0003700|GO:0006355
Dere10g1810 281 MobiDBLite consensus disorder prediction 82 103 - -
Dere10g1810 281 MobiDBLite consensus disorder prediction 1 34 - -
Dere10g1810 281 Gene3D - 193 249 - -
Dere10g1810 281 SUPERFAMILY Leucine zipper domain 193 250 IPR046347 GO:0003700|GO:0006355
Dere10g1810 281 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Dere10g1810 281 PANTHER G-BOX-BINDING FACTOR 3-RELATED 70 264 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dere10g1810 281 Pfam bZIP transcription factor 190 249 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1810 Dere-ChrDere10 31120336 31125228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1810 159 271 bZIP Transcription Factor Family AT4G36730 40.945 4.74e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere10g1810 bZIP_1 3e-13 CL0018