Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1782 ATGCTGCTCCTGCTTCTGTTTCATATCATCAAGATCTTGGCTTTGGTTTCTCAGCTTGAAGTTATGCTTATGGCTTCTTCACCTGCATGACTACCTAGAGAAGTGGAACAGACACCCCTATTGCCCAAATATTGCTTCTGGTCTATTTCTCATGCCATTGACATCAACTCAGGAAGAGGGCTGTCAATTTTCTCTGAGCTTGCACAAATTTGGCAATTGACATTGATGGATAAGCAGAAGAATGCAGCAGCCAATAAGCATCCTGATTTCTTTAAACGTATCCCAAATGCTTTTGTGGCCTACTTACGTGGAAGGGTGCCTGAAATGGCCATCCTTAAAAGTCATCGAGGGAGAATTTGGCATGTCAACATCAGTAACTTTAATGGTCACTTATATTTTGATGATGGTTGGAAGGATTTCTCAGTAGACAAATCATTAGAGGTGGGGGACTTCATCACTTTCACATATGGTGGAACTAGTGTATTTAAGTTCAAAATCTTCGAATTAAATGCTTGCGAAATGATGGAGACAAAGGAAGAAAAAGAAGATGAAGAAAAGGATTCTGTAATGGAGGATGCAGAACCAGAAGGAGGAAGAGAGGCAGAGGAGGAGGAGAATGAGGAAGAAGAAGATGATGATGCTGATGAGTATACAGAGGCAAAAGAAGAAGATGATAATGCTGATGAGTATACAGAGGTGGAGGAAGAGGAAGAAGGAGTAAACAGGGGAAGCAGGAAGAGAAAATTCGGCTCTCTACCTGCTGGTTTATTTGCTTTAGGAGGTATTGCAGGAGTCTCGTCCACTAAGGCTAAACAAACTAGCATTGAAGATTATGGGATTGATGCAGAAAATTATGTTCAGCCAGACAATCCATACTTTGTTGCAACACTAAGAGAAATATGGAAAAACGAGTTGGTCAGAATTCTTTTATCTTCTGCGTTTTAG 945 0.4074 MLLLLLFHIIKILALVSQLEVMLMASSPAXLPREVEQTPLLPKYCFWSISHAIDINSGRGLSIFSELAQIWQLTLMDKQKNAAANKHPDFFKRIPNAFVAYLRGRVPEMAILKSHRGRIWHVNISNFNGHLYFDDGWKDFSVDKSLEVGDFITFTYGGTSVFKFKIFELNACEMMETKEEKEDEEKDSVMEDAEPEGGREAEEEENEEEEDDDADEYTEAKEEDDNADEYTEVEEEEEGVNRGSRKRKFGSLPAGLFALGGIAGVSSTKAKQTSIEDYGIDAENYVQPDNPYFVATLREIWKNELVRILLSSAF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1782 314 CDD B3_DNA 90 167 IPR003340 GO:0003677
Dere10g1782 314 Gene3D - 76 172 IPR015300 -
Dere10g1782 314 SMART B3_2 90 170 IPR003340 GO:0003677
Dere10g1782 314 PANTHER B3 DOMAIN-CONTAINING 83 221 - -
Dere10g1782 314 MobiDBLite consensus disorder prediction 185 236 - -
Dere10g1782 314 Pfam B3 DNA binding domain 92 168 IPR003340 GO:0003677
Dere10g1782 314 ProSiteProfiles B3 DNA-binding domain profile. 94 170 IPR003340 GO:0003677
Dere10g1782 314 MobiDBLite consensus disorder prediction 177 246 - -
Dere10g1782 314 SUPERFAMILY DNA-binding pseudobarrel domain 91 174 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1782 94 214 REM Transcription Factor Family AT3G06220 31.298 2.10e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dere10g1782 B3 1.3e-12 CL0405