Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1765 ATGGGTTCGCTTCCTCCTCCGCAACTGAGCTTGGATTTGAGACCCACTTTTGTACCCAAAACGATCACTGATTTTCTCTACGAGGTTTCCATGATCGCCAATGCGCCCGACAAGCTCTCGAGGCTCGACGATTTTGTCAAGAGATTGGAAGAGGAAATGAAGAAGATTGACGCCTTTAGGCGCGAGCTTCCTCTCTGCATGCTCCTCTTGAATGACGCAATTTTAGCTCTGAAGGAGGAATCGGCAAAATTCAGGACACCTAATTCTCAGCCAGTATTGGAAGAATTTATTCCCCTGAGGAAAGAATGTGATCAGAAGGAGGAAAACGAAAAAGAAAATGAATGCAGAGATAAGAAGAATTGGATGAGTTCCGTTCAGCTCTGGAACACTGCTAATTATCCCACTACGAATAATGCCTGTGAACCAAAACAACATTATAAATTAGAAATCAAGAAAAACGAAGAAGAAGAAACCTCTGTGACTGAGGATCCTTTCCAATCTTGTAGAAATAGAAATGGAAGTAGAGTGTTTATGCCTTTTACAACATACCCTTCAGTCCCTGTGACAACTATGGCAACAAAGGAAGAAAAGGAAGAGTCTGACATTAATGGACTTTCTCTTGTGACTCCTGGATTAAAAAATCCGAGAGAGGGATCTGTTTCTAGTGGATCAAGAATAACCTCTAGCAGAGCTGTTTCATCCTCTCCTTGCAGTGACCAACCAAGTTTACGCACTGGACAGCAGCAGACTGGCCGGAAACAGAGAAGGTGTTGGTCGCCAGAGTTGCATCGTCGGTTTATCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCAACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAACGATGAAGTGAAGAGTCATTTACAAAAATACCGACTGCATACTCGAAGACTTCCAGCTTCCACAGCTGGCCCTGGTAATCAATCTGTTGTAGTTCTTGGAGGTTTATGGATGTCCCAAGATCAGTATAATGACTCCACGAAGGGTAGCATTTCAGGGTCTGGCTCTCCTCAAGGTCCTCTCCAGTTAACTTCAGGATCTGGGGGAGGAACGTCCCCAACTGAAGATGACAGCATGGAAGATGATGAAGATGAAAAATCCAGAGAGCTATAG 1155 0.4442 MGSLPPPQLSLDLRPTFVPKTITDFLYEVSMIANAPDKLSRLDDFVKRLEEEMKKIDAFRRELPLCMLLLNDAILALKEESAKFRTPNSQPVLEEFIPLRKECDQKEENEKENECRDKKNWMSSVQLWNTANYPTTNNACEPKQHYKLEIKKNEEEETSVTEDPFQSCRNRNGSRVFMPFTTYPSVPVTTMATKEEKEESDINGLSLVTPGLKNPREGSVSSGSRITSSRAVSSSPCSDQPSLRTGQQQTGRKQRRCWSPELHRRFINALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTAGPGNQSVVVLGGLWMSQDQYNDSTKGSISGSGSPQGPLQLTSGSGGGTSPTEDDSMEDDEDEKSREL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1765 384 MobiDBLite consensus disorder prediction 193 258 - -
Dere10g1765 384 Pfam Myb-like DNA-binding domain 255 306 IPR001005 -
Dere10g1765 384 MobiDBLite consensus disorder prediction 215 255 - -
Dere10g1765 384 FunFam Myb family transcription factor 252 310 - -
Dere10g1765 384 Gene3D - 252 310 - -
Dere10g1765 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 381 IPR044787 GO:0003700|GO:0006355
Dere10g1765 384 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 308 IPR006447 GO:0003677
Dere10g1765 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 250 310 IPR017930 -
Dere10g1765 384 MobiDBLite consensus disorder prediction 338 368 - -
Dere10g1765 384 MobiDBLite consensus disorder prediction 338 384 - -
Dere10g1765 384 SUPERFAMILY Homeodomain-like 250 311 IPR009057 -
Dere10g1765 384 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1765 Dere-ChrDere10 30722253 30724347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1765 8 332 G2-like Transcription Factor Family AT2G03500 40.176 5.13e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere10g1765 Myb_DNA-binding 4.5e-07 CL0123