Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1727 ATGTTCTGCGGGTTTGCGTTCTTATTTGGGTTGTTGGCATTTCTGGGAATGCAACTTCGCGTAATAATGGCAGATTGCCCTTTGGATTTAAGGGGTTCAAACTTTACACTAGCACCTTCTTTATGCTCTAATCAAGGTGACAGAGGAAAATGTTGCCGCTACATTAATGCCAACATTGCAGTTTCTGTTGCTCGTTTTGCTAATGTAACAAGAAACCTAGGAGTCACTCCAAATGCTTCTGAGCTGTGTCTCCGGACTATATCTCAGATCTTGCAACTTTATGGAGTTCCACAAAATGCAACAATTTTCTGTGGTTTTGGGAAAAAAATCTCAGTTAATTATGAGTGTGAGGGTCGAACTACTGTCTTGCAGATGCTTGAGTCTCCCCGATTTGCAGAGGTCATGGAAAATTGCAAAGTGCCACTTGCTGAGGAAAGTAAATGCAAGAAGTGCTTGAATTCTGGCATTAGTTACATACATCATCTGATAGGCTTTGTAGATAATATAACACTCAGTACATGCCGCGATGCCACCTTTGCAGCATTGGCAAGCCAAGTTGATGAGATATCTACCGTTGACATTGCAAGCTGTCTCTTTGGAGTTCAAGGGCTTCTTGTGCCTCCTGAGTCATCCCCATCTCTGCCAACGCCTGAGGCTTCTCCTAGTCCACTGGTTGCTGATAGCCCTAGTCAATTACTGTTAGGTGTACCTCATAAGGGAAAGCACCATTCATACCACTTGACACTAATTCCAGGTATTGGTATTGCCGTCACAGCTGTTGCTGCCATAATGCTCTTGGTCTTGATTGTTCTAATTCGTCAGAAAAGCAAAGAGCTAGAGGGGCCTGAGAATATTAGTAAGACCTCTTCAAAAGCCTTAACCTTTTGTGCAATGCAGAAATTTCAGGAAGTATATAAAGCTCATTTCAGTAACGGTCTAGTGTTAGCAGCAAAGCGAATGAACAAAGTTTCAGAGCAAGGGGAGGATGAGTTTTGTCGAGAAATAGATCTTCTTGCTCGGTTACATCATCGGCATCTTGTTGCGTTAAGAGGTTTTTGTGTTAAAAATCATGAGAGGTTTCTGATGTATGAATACATGGAAAATGGAAGCTTGAAGGATCATCTTCATTCTCCTGGTAAAACGCCTCTAAGTTGGCGAACTAGAATCCAAATCGCCATTGATGTGGCTAATGCAATGGAGTACCTCCATTTCTATTGTGATCCTCCTCTGTGGCACAGAGATATAAAGTCAAGCAATATTTTACTGGATGAGAATTTTGTTGCTAAGTTAGCTGATTTTGGCCTTGCACATGCTTCGAAAGATGGTTCTATATGCTTCGAAGCTGTAAATACTGATATCCGGGGAACTCCAGGTTATATGGATCCTGAATATGTGGTTACTCAAGAGTTGACCGAGAAAAGCGATATTTACAGTTTCGGAGTGCTGTTACTGGAAATTGTGACTGGAAGACGAGCAATTCAAGATAATAAGAATCTGGTAGAATGGGCACAACCATACATGGGACCAGATTCAGTAACAAGATTGATGGAGCTAGTGGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAGACAGTAGTGTCTATAGTAGAATGGTGCACACAGAGAGAAGGCAGGACAAGGCCTTCAATAAAACAAGTCCTGAGGCTTCTGTATGAGACTTCAGAACCTATGCATAGTGGGTTTCAACAAAATGTTGGAGATGAAGAATGTGAAGGGAATCAGCAGAGCGGCAGAAGAAGCAAGGAAAAAGTATACGGAAAGGAAGCGTTATTTCAGAGTGGGGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCAAGGTCCTATTGCAGTAGAAGCTTTTTACTTGAGACAAGCTCCCCACAGTCTCCTTTAAATATATTCTCCGTCTAA 1923 0.4207 MFCGFAFLFGLLAFLGMQLRVIMADCPLDLRGSNFTLAPSLCSNQGDRGKCCRYINANIAVSVARFANVTRNLGVTPNASELCLRTISQILQLYGVPQNATIFCGFGKKISVNYECEGRTTVLQMLESPRFAEVMENCKVPLAEESKCKKCLNSGISYIHHLIGFVDNITLSTCRDATFAALASQVDEISTVDIASCLFGVQGLLVPPESSPSLPTPEASPSPLVADSPSQLLLGVPHKGKHHSYHLTLIPGIGIAVTAVAAIMLLVLIVLIRQKSKELEGPENISKTSSKALTFCAMQKFQEVYKAHFSNGLVLAAKRMNKVSEQGEDEFCREIDLLARLHHRHLVALRGFCVKNHERFLMYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANAMEYLHFYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEAVNTDIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMGPDSVTRLMELVDPNVRESFDLDQLQTVVSIVEWCTQREGRTRPSIKQVLRLLYETSEPMHSGFQQNVGDEECEGNQQSGRRSKEKVYGKEALFQSGDGRYLASSSSTSRSYCSRSFLLETSSPQSPLNIFSV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1727 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Dere10g1727 640 Pfam SPARK 25 157 IPR043891 -
Dere10g1727 640 CDD STKc_IRAK 301 560 - -
Dere10g1727 640 ProSiteProfiles Protein kinase domain profile. 290 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1727 640 Gene3D Transferase(Phosphotransferase) domain 1 367 584 - -
Dere10g1727 640 PANTHER OS01G0750732 PROTEIN 162 586 - -
Dere10g1727 640 SUPERFAMILY Protein kinase-like (PK-like) 301 563 IPR011009 -
Dere10g1727 640 MobiDBLite consensus disorder prediction 582 596 - -
Dere10g1727 640 SMART serkin_6 295 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1727 640 FunFam Putative receptor-like protein kinase 366 568 - -
Dere10g1727 640 Pfam Protein kinase domain 301 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1727 640 MobiDBLite consensus disorder prediction 568 596 - -
Dere10g1727 640 Gene3D Phosphorylase Kinase; domain 1 298 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1727 Dere-ChrDere10 30288744 30293341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1727 24 639 Receptor kinase-like Gene Family AT3G19300 57.538 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Dere10g1727 Pkinase 1.7e-44 CL0016