Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1715 ATGCATTTCGTAACAAAGCGACACTGGAAAAATATCTCAGTCACACTTCTTGAAGTCTTTCAACATTTATTTAAATATCATTTCCTTCCTTTTCCGTATATTGTGGGGGCGCATGATCCACACTCATGCAATACAAGAACCTCACCAACCGCGACCGGTTGGCAGCCGGTTCAACCAAATACTACTGCGTTGTCTTCCTCTCACCGGTTCAAACCGGACCTTTTTCCTACTCTATATCATGCCATCCTCATTCCTCTTTGTCAACAACGCCCTCGATTGACTCACAAACAGAGCAGAAGCAAAGAAGAGAGAGGGAAAGTAAACGAGACGAACCAAGGTTTAGAGTTAGTAATGGCGGATCAAAATCAATCTGAAGCAGGAAGGCACCAAGAGGTTGGCCACAAGAGCCTTTTGCAGAGCGATGCTCTCTACCAGTATATTCTGGAGACCAGTGTCTACCCTAGAGAACCTGAACCCATGAAGGAGCTCAGAGAGATCACAGCCAAACACCCTTGGAACATCATGACAACCTCAGCAGACGAGGGTCAATTCTTGAACATGCTCCTTAAGCTCATCAACGCTAAGAACACCATGGAAATTGGTGTCTACACTGGATACTCCCTGCTCGCTACTGCTCTGGCTCTTCCTGAAGATGGAAAGATATTGGCCATGGACATCAACAGAGAAAACTACGAACTGGGTCTTCCTGTAATTCAGAAAGCTGGTGTTGCCCACAAAATCGATTTCAGAGAAGGCCCTGCTCTCCCTGTTCTTGACGAACTCGTTAAAGATGAAAAGAACCATGGGAGCTTCGATTTCATATTCGTGGATGCGGACAAGGACAACTACCTAAACTACCACAAGAGGCTAATTGATTTGGTGAAGGTGGGAGGAGTGATCGGGTACGACAACACCTTGTGGAATGGCTCTGTGGTGGCACCACCTGATGCGCCTCTCAGAAAGTACGTCAGATATTACAGGGACTTCGTATTGGAGCTCAACAAGGCCTTAGCCGTGGACCCTAGGATCGAAATCTGCATGCTTCCCGTTGGTGATGGGATCACAATCTGCCGTCGGATCAGCTGA 1086 0.4705 MHFVTKRHWKNISVTLLEVFQHLFKYHFLPFPYIVGAHDPHSCNTRTSPTATGWQPVQPNTTALSSSHRFKPDLFPTLYHAILIPLCQQRPRLTHKQSRSKEERGKVNETNQGLELVMADQNQSEAGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELREITAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDELVKDEKNHGSFDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRIS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1715 361 Gene3D Vaccinia Virus protein VP39 135 361 IPR029063 -
Dere10g1715 361 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 136 360 IPR002935 GO:0008171
Dere10g1715 361 Pfam O-methyltransferase 149 360 IPR002935 GO:0008171
Dere10g1715 361 FunFam Caffeoyl-CoA O-methyltransferase 1 129 361 - -
Dere10g1715 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 359 IPR029063 -
Dere10g1715 361 PANTHER O-METHYLTRANSFERASE-RELATED 133 360 - -
Dere10g1715 361 CDD AdoMet_MTases 199 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1715 Dere-ChrDere10 29834820 29838134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1715 120 361 Monolignol Biosynthesis Gene Families AT4G34050 91.736 9.13e-171 475