Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1714 ATGGCGCAGCCGCAGAAAGCAATCGAGCATGTTCAGTGCTTCGGCCGCAAGAAGACCGCCGTCGCCGTTACCCACTGCAAGCGCGGCCGTGGACTAATCAAGATTAATGGCTGCCCCATCGAACTAGTTGAGCCGGAGATCCTCCGCTTCAAGGCTGTGGAACCCATCCTCCTGCTGGGAAGAGAACGTTTCGTCGGCGTCGACATGCGTATCCGGGTCAAGGGCGGTGGTCACACCTCTCAGATATACGCCATTCGCCAGAGCATAGCGAAAGCTCTGGTCGCTTTCTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAGATCAAGGACATTCTGGTCAGGTATGACCGAACCCTGCTTGTCGCTGATCCAAGGCGTTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGCGCTAGGTTCCAAAAATCATACCGTTGA 444 0.5608 MAQPQKAIEHVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRERFVGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1714 147 Gene3D - 2 147 IPR014721 -
Dere10g1714 147 PANTHER RIBOSOMAL PROTEIN S9 7 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dere10g1714 147 SUPERFAMILY Ribosomal protein S5 domain 2-like 10 147 IPR020568 -
Dere10g1714 147 ProSitePatterns Ribosomal protein S9 signature. 75 93 IPR020574 GO:0003735|GO:0005840|GO:0006412
Dere10g1714 147 FunFam 40S ribosomal protein S16 3 147 - -
Dere10g1714 147 Pfam Ribosomal protein S9/S16 15 147 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1714 Dere-ChrDere10 29825798 29826241 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1714 5 147 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.413 9.39e-92 261