Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1705 ATGGGCAACATTTGTGTGTGTGTGTTGTTCTTCTTATCTGCCTTTCTGCTTCGGTCTTCGTATTCTCAAGAGCTAAATGGCTCAAAACGAGAAGCTCTAGAGATTATCATAGGCGGTGGCGGTGGTGGTAGTGCTCCTTCTCCTTCCCCAGAATGTGGAGAATGTCAGAATCCTCCACCTCCGATTGCTTGTCCACCTCCACCATCTCCATCCCCGCCTCCTCTTCCTTCTCCACCACCTCCACTAACTCCATCACCGCCTCCTCCTCCTTCTCCGCCACCTCCACCAACTCCATCACCGCCTCCTCCTCCTTCTCCGCCACCTCCACCAACTCCATCACCGCCTCCTCCTCCTTCTCCGCCACCTCCACCAACTCCATCACCGCCTCCTCCTCCTTCTCCGCCACCTCCACCATCTCCATCACCGCCTCCTCCTCCTTCTCCGCCACCTCCACCATCTCCATCACCGCCTCCTCCTCCTTCTCCACCACCTCCACCGTCTCCATCACCGCCTCCTCCTCCTTCTCCACCACCTCCACCGTCTCCATCACCGCCTCCTCCTCCTTCTCCATCACCACCGCCGCCATCTCCGCCACCACCTCGAAGGGTAAACCGCCTGGAACGAGCGAAGCGCGTGCTTCTGAATTTCAAATATAACATCTTGGATACCAAAGGCTATACGAACAACTGGAAGAAATCCACCAACACTTGTGATTTCACAGGCATCCGTTGCGCCCGTTATCCGATTGACAAGCAGCTAGCAGTCGCCGGACTAGACTTTAACGGATTCGGATTCTCCGGGCGGAAAAATAGACGGCTGTTCCTCTCAGGACTATTGGACAAGTTAGAAGAGTTAGCATTCTACCACGTGAACTCTAACAACTTCACCGGCATGGTCCCAAGTGAAATCTCCAAGTTCAAATATTTCTACGAGCTCGACCTCAGCAACAACAAGTTGGTCCGTGAGTTCCCAGAAGAAGTGCTTCAGGCGAAAGGACTAGTGTTCCTGGATCTCAGGTTCAACCAACTTTACGGGCCAATTCCACCACAACTCTTTCACATGGATTTAGACGTCATCTTCATCAACAACAACCATTTATATGGAAACCTTCCTGATAATTTCGGGTCCACACCGGCCAGATTTCTCACATTCGCCAACAACAAATTCACCGGCCCAATCCCCAGCAGTATCGGTTGGGCCTCAAAGACACTCACAGAAGTGCTTTTCCTGGGGAATCAGTTTTCTGGTTGCTTGCCTTATGAAATTGGGAACCTCAAAAAAGCTACGGTTTTCGATGTGAGCAAGAATTGGCTGACTGGTCCAATCCCACATTCCTTTGCCTGCCTAGAAAGTATACGATATCTGAATTTGGCTCATAATCAATTCTACGGCGCCGTTCCGGAGACGGTGTGCAAGCTTCCAGGACTCCGAAACAATGGGAATCTAACGTTGTCGGGTAATTATTTTACCCAGGTGGGACCCGAATGTAGGAAGCTGATTAAAACGAAAGTGCTGGATGTGAGCAGAAATTGCATTCTGGGACTTCCTCATCAGAGACCAGAACCTCAGTGTTCCGAGTTTTTCTCCAAGGTTAAGCCGTGTCCGAATCCGAGGTCTTTCCACATTGTGCCTTGTATGAAGTACTACGCAAGCTCCGAGAGGACCGCGTCTGGTCCCGAAGCGACCGGTTCACCGCCGGCGCCGGTGACCTACAACTCCCTGAAACCGCATCGTTTGTGA 1740 0.5184 MGNICVCVLFFLSAFLLRSSYSQELNGSKREALEIIIGGGGGGSAPSPSPECGECQNPPPPIACPPPPSPSPPPLPSPPPPLTPSPPPPPSPPPPPTPSPPPPPSPPPPPTPSPPPPPSPPPPPTPSPPPPPSPPPPPSPSPPPPPSPPPPPSPSPPPPPSPPPPPSPSPPPPPSPPPPPSPSPPPPPSPSPPPPSPPPPRRVNRLERAKRVLLNFKYNILDTKGYTNNWKKSTNTCDFTGIRCARYPIDKQLAVAGLDFNGFGFSGRKNRRLFLSGLLDKLEELAFYHVNSNNFTGMVPSEISKFKYFYELDLSNNKLVREFPEEVLQAKGLVFLDLRFNQLYGPIPPQLFHMDLDVIFINNNHLYGNLPDNFGSTPARFLTFANNKFTGPIPSSIGWASKTLTEVLFLGNQFSGCLPYEIGNLKKATVFDVSKNWLTGPIPHSFACLESIRYLNLAHNQFYGAVPETVCKLPGLRNNGNLTLSGNYFTQVGPECRKLIKTKVLDVSRNCILGLPHQRPEPQCSEFFSKVKPCPNPRSFHIVPCMKYYASSERTASGPEATGSPPAPVTYNSLKPHRL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1705 579 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 204 559 - -
Dere10g1705 579 MobiDBLite consensus disorder prediction 52 202 - -
Dere10g1705 579 Pfam Leucine rich repeat N-terminal domain 209 244 IPR013210 -
Dere10g1705 579 MobiDBLite consensus disorder prediction 39 203 - -
Dere10g1705 579 PRINTS Proline rich extensin signature 96 121 - -
Dere10g1705 579 PRINTS Proline rich extensin signature 76 93 - -
Dere10g1705 579 PRINTS Proline rich extensin signature 59 75 - -
Dere10g1705 579 SUPERFAMILY L domain-like 211 515 - -
Dere10g1705 579 Gene3D Ribonuclease Inhibitor 380 532 IPR032675 -
Dere10g1705 579 Gene3D Ribonuclease Inhibitor 206 379 IPR032675 -
Dere10g1705 579 MobiDBLite consensus disorder prediction 556 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1705 Dere-ChrDere10 29689982 29691721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1705 205 530 Leucine-rich Repeat extension Gene Families AT4G13340 42.988 4.38e-74 249