Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1695 ATGGCAATCCTCCACCATCACAATGACCACCTAGAACACCATGAAAACTCTTCATCCTTCCTTGATGCTCTGTACTGTGATGAAGAAAAATGGGAGGAGGAAGAAGTTCTAGATGTAGAAGGGAGTAATGACACCTGTCTTCTTCTTCCTCCTCGGATCTTGTTGGAGCAAGATTTGTTCTGGGAAGATGGAGAACTGAACTCTCTATTATCCAAGGAAGAGGAAGCTTGTTTTGTTCTGAATGTTGATCTTTCTTTGGCTCGTCGTGAGGCTGTGGAATGGATGCTTAAAGTGAATGCCCATTACGGGTTCTCTGCTCTCACGGCAACACTGGCCATTAACTATCTGGACAGATTCCTTTCGAGCTTCCATTTTCAAAGAGAGAAGCCTTGGATGATCCAGCTGGTGGCTGTCACCTGCCTCTCTTTGGCTGCAAAAGTTGAAGAGACTCAAGTCCCACTTCTTCTAGACCTCCAAGTGGAAGATACTAAATATATGTTTGAGGCAAAGAATATACAGAGAATGGAGCTGCTTGTTCTATCGGCCCTTAAATGGAAGATGCACCCAGTAACCCCACTCTCTTTTCTAGATCACATCATAAGGAGGCTTGGATTGAAAACCCATCTTCACTGGGAATTCCTCAGGCGCTGCGAGTATCTCCTACTCTCAGTTCTTTCAGATTCTAGATTTATGGGTTATCTTCCTTCCGTATTGGCTACTGCGACAATGCTGCATGTGGTAGAGCAGATTGAGCAGAGTGAAGGAGTGGAATATAAAAATCAGCTTCTGGAGGTTCTGAAAATGAACAAGGAGAAAGTAGATGAGTGTTATAATGCAATGCTGGAGGTCTCAAAGGCCAATAATTATTATAATAATGGGCATAACAAGTCTAAGAAGCGAAAGTGTGAGGAAATCAGTCCTGGCAGCCCAAGTGGCGTAATCGATGTGGTTTTTGGGTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATGTTCATCCCCAGAGCCTCTGTTCAAGAAGGCCAGACCCCAAGAACAACAACAGCAACAACAAATGACCTTGTCGCCGTTCAACCGGGTAATTGTCGGAATCGTTGGCACCTCTCCTTAA 1119 0.4477 MAILHHHNDHLEHHENSSSFLDALYCDEEKWEEEEVLDVEGSNDTCLLLPPRILLEQDLFWEDGELNSLLSKEEEACFVLNVDLSLARREAVEWMLKVNAHYGFSALTATLAINYLDRFLSSFHFQREKPWMIQLVAVTCLSLAAKVEETQVPLLLDLQVEDTKYMFEAKNIQRMELLVLSALKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEYLLLSVLSDSRFMGYLPSVLATATMLHVVEQIEQSEGVEYKNQLLEVLKMNKEKVDECYNAMLEVSKANNYYNNGHNKSKKRKCEEISPGSPSGVIDVVFGSDGSNDSWAVGSSLCSSPEPLFKKARPQEQQQQQQMTLSPFNRVIVGIVGTSP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1695 372 Gene3D - 87 188 - -
Dere10g1695 372 Pfam Cyclin, N-terminal domain 87 187 IPR006671 -
Dere10g1695 372 SUPERFAMILY Cyclin-like 191 286 IPR036915 -
Dere10g1695 372 SMART Cyclin_C_2 190 311 IPR004367 -
Dere10g1695 372 ProSitePatterns Cyclins signature. 88 119 IPR006671 -
Dere10g1695 372 SMART cyclin_7 93 181 IPR013763 -
Dere10g1695 372 SMART cyclin_7 194 282 IPR013763 -
Dere10g1695 372 FunFam CYCLIN D32 189 278 - -
Dere10g1695 372 PANTHER CYCLINS 69 284 IPR039361 -
Dere10g1695 372 SUPERFAMILY Cyclin-like 62 188 IPR036915 -
Dere10g1695 372 FunFam D3-type cyclin 81 188 - -
Dere10g1695 372 Pfam Cyclin, C-terminal domain 190 306 IPR004367 -
Dere10g1695 372 CDD CYCLIN_AtCycD-like_rpt1 87 185 - -
Dere10g1695 372 Gene3D - 189 279 - -
Dere10g1695 372 CDD CYCLIN_AtCycD-like_rpt2 190 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1695 Dere-ChrDere10 29518321 29519731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1695 13 301 Core Cell Cycle Gene Families AT4G34160 58.362 1.40e-114 337