Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1684 ATGAATCTTAACTCCAAGAATCTCTATCTGGGGTGGAAAGTTTCGTTCTTTCATCTTCTTCTTCTTCTTCGGTCATTTGCTCTGAACACTGATGGGGTTCTCTTGCTTTCCTTCAAGTACTCCGTCCTCAGCGACCCAAAGTCAGTGTTAGATAATTGGAGCTACGGCGACGAATCACCATGCTCGTGGAATGGAGTCACATGTACAGAAATTGGAACCATGCTCAGAGTGACTAGCTTGGTTCTTCCCAATAGCCAGCTTCTGGGTTCGATTTCTGAAGACCTTGGGATGATCCAACACCTTCGGGATCTTGATCTTTCCAACAATTTTCTTAACGGGTCTTTGCCCAATTCTATCTTCAACGCTTCTGAGCTTCGAGTTCTTTCTCTCGCCAACAATGTCATCTCCGGTGAGCTATCTGAATCGATTAGTGAGTTGAAAGGTCTTCAAGTTTTGAACCTATCTGACAATGCCTTTGCGGGGTCGATCCCGAAAAGTCTCATCGAACTAAAAAATCTGACCTTTGTTTCTTTGAGGAGTAATTACTTTTCTGGTGAAGTTCCAAGTGGGTTTATATTTGTTCAGACTTTAGATCTGTCTTCGAATTTGCTTAATGGGTCTTTACCAGATGACTTTGGTGGGGAAAGCTTGAAATACTTGAACCTCTCTTACAACAAGATTTCTGGAACAATTTCACCCGAATTTGCCAAGAAGATACCAGGAAACTCCGCAGTTGATCTCTCCTTCAACAATCTAACGGGTCCAATACCACAATCTCTGGCTTTGCTCAGCCAAAAAACAGAGTCACTTTCTGGGAATTCTGATCTCTGTGGAAAGCCCCTGAAAATCCCCTGTTCTATTCCTTCTACTCTTTCAAACCCACCCAACTCCAACACTTCATCATCACCAGCAATTGCAGCCATACCCAAAACAATCGACACAAACCCAAAAACAAACAGCTCAGGAACCCCCAATGGTTCTCAGAATAAGCCACCAAATGGCCTAAAACCGTCCACCATAGCCGGAATCGTCGTCGGGGATTTGGCCGGCATAGGCGTTTTAGCCATAATCGTTCTCCTAGTCTACCAACAACGGAAGAAAAAATATCCAAAACCTACTGAAAATGCTCCTAAAACCACAGCAAAACAAGACCCAGAAATTAAAAAACCCACAATCCCCTGTTTCTGGTTAGCAATTGACGAAAAGGAGACGTCGGAAGCGACGAGCTCCGACAGCGACCAAGAGAATAATAACATGAACATTGAAATGACGACCCCAAACGGGAACCTTGAGAAAGAAGGGAGGCTTGTGACGGTGGACGGAGAGACGAGGCTGGAGCTAGAGACGCTGCTGACGTCGTCGGCGTATATTCTGGGAACGAGCCGAGGAAGCATAGTGTACAGGACAGTGCTCGAGGATGGAAGAGCGTATGCTGTGAGAAGAATTGGGGTTGGAGAGTGTGGGATCGAGAGGATGAAGGATTTCGAGACTCAAGTGAAGGCAATCGCGAAGATTCGTCATCCCAATTTGGTTAGGGTTCGAGGATTCTGCTGGGGAGAGGATGAGAAGCTTGTGATCTGCGACTATGTTCCCAATGGTAGCCTCGCCAACATCTGTCACAGAAGAACGGGATCATCATCGCCCATGAACATGCCCTTGGAGGCTCGGCTGAAGATAGCAAGAGGAATAGCACGAGGCATAGGTTTCATCCACGACAAGAAACACGTCCACGGCAACATCAAACCGTCCAACATCCTCTTCAACTCCGACATGGACCCCATCATCACCGACTTCGGCCTCGACCGCCTCCTCTGCAACTACACCATCCACCTCCGAGCGAACAACTCTTCTCGCCAACAACCCGACCACCTCCCTCCACTGACCTCATCGTCTTCCGGCGGGGGTGGGACCCACCACTTGCCCTATCAAGCGCCAGAGTGGCCCCACATTATCAAACCCACCCCCATGTGCGATGTCTTCTCCTTCGGCATTGTCTTGCTCGAGCTTCTCAGTGGGAGATTTGCCTCAGACCTGGAAATACACCAGTGGCCTGAGTGTGATGACGTGGAGGAGGAGAGGAACAGGGTGTTGAGGATGGCTGACGTGGCCATAAGGTCTGACATGGAAAACAGGGAAGATGTTATATTGGGGTGCTTCAAGTTAGGGTTTAGCTGTGCCTCTGTTGTCCCACAGAAGAGACCCTCCATGAAAGAGGCTCTGAACATCTTGGAGAAGATGACCCCCCACTAA 2250 0.4813 MNLNSKNLYLGWKVSFFHLLLLLRSFALNTDGVLLLSFKYSVLSDPKSVLDNWSYGDESPCSWNGVTCTEIGTMLRVTSLVLPNSQLLGSISEDLGMIQHLRDLDLSNNFLNGSLPNSIFNASELRVLSLANNVISGELSESISELKGLQVLNLSDNAFAGSIPKSLIELKNLTFVSLRSNYFSGEVPSGFIFVQTLDLSSNLLNGSLPDDFGGESLKYLNLSYNKISGTISPEFAKKIPGNSAVDLSFNNLTGPIPQSLALLSQKTESLSGNSDLCGKPLKIPCSIPSTLSNPPNSNTSSSPAIAAIPKTIDTNPKTNSSGTPNGSQNKPPNGLKPSTIAGIVVGDLAGIGVLAIIVLLVYQQRKKKYPKPTENAPKTTAKQDPEIKKPTIPCFWLAIDEKETSEATSSDSDQENNNMNIEMTTPNGNLEKEGRLVTVDGETRLELETLLTSSAYILGTSRGSIVYRTVLEDGRAYAVRRIGVGECGIERMKDFETQVKAIAKIRHPNLVRVRGFCWGEDEKLVICDYVPNGSLANICHRRTGSSSPMNMPLEARLKIARGIARGIGFIHDKKHVHGNIKPSNILFNSDMDPIITDFGLDRLLCNYTIHLRANNSSRQQPDHLPPLTSSSSGGGGTHHLPYQAPEWPHIIKPTPMCDVFSFGIVLLELLSGRFASDLEIHQWPECDDVEEERNRVLRMADVAIRSDMENREDVILGCFKLGFSCASVVPQKRPSMKEALNILEKMTPH 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1684 749 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 193 - -
Dere10g1684 749 Pfam Leucine Rich repeat 216 229 IPR001611 GO:0005515
Dere10g1684 749 Pfam Leucine Rich Repeat 100 119 IPR001611 GO:0005515
Dere10g1684 749 MobiDBLite consensus disorder prediction 616 637 - -
Dere10g1684 749 FunFam Leucine-rich repeat receptor-like protein kinase 194 287 - -
Dere10g1684 749 ProSiteProfiles Protein kinase domain profile. 452 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1684 749 Gene3D Ribonuclease Inhibitor 193 287 IPR032675 -
Dere10g1684 749 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Dere10g1684 749 MobiDBLite consensus disorder prediction 311 334 - -
Dere10g1684 749 SUPERFAMILY Protein kinase-like (PK-like) 457 745 IPR011009 -
Dere10g1684 749 Gene3D Phosphorylase Kinase; domain 1 431 529 - -
Dere10g1684 749 SUPERFAMILY L domain-like 31 282 - -
Dere10g1684 749 Gene3D Transferase(Phosphotransferase) domain 1 530 749 - -
Dere10g1684 749 Pfam Protein kinase domain 458 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1684 749 MobiDBLite consensus disorder prediction 410 427 - -
Dere10g1684 749 MobiDBLite consensus disorder prediction 403 428 - -
Dere10g1684 749 MobiDBLite consensus disorder prediction 616 639 - -
Dere10g1684 749 Gene3D Ribonuclease Inhibitor 28 192 IPR032675 -
Dere10g1684 749 PANTHER OS05G0588300 PROTEIN 169 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1684 Dere-ChrDere10 29422891 29425892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1684 27 746 Receptor kinase-like Gene Family AT2G15300 52.255 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere10g1684 Pkinase 9.5e-28 CL0016