Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1672 ATGGTACACTGCGTTGGAGGACGAAACCACGGTTTTCTCGGGCCAGATTTTTCCCCTTTTCTCTTTCAATCTCTGATTCAGAACTGCTTAGAGTTGTTTAGAGTTCTAGGCCATTCATATTTTGTATCTGGGTTTTACATTTCTGGGATGGAGGACAATACCCAGGAATTCCAAGGGGACCATCTGACCCCACTCACTGGTTTCTCTCAGTTACTTTTCGGAGATGACGATGTGGACCACCATCCCCCCCACCACCACCACCACAGCGCTCTTAGCTGTTCGTCTCTTTTCTCGATTGGGAACACTCCCAAAATCCTCTGTTTCGGCAACTATCAAGACAACAACCAAGGGGAGTTTTTTGTTTCCGAAACCAACGCTGTTACCCCACAGAAATCTGTCATCACTTCTAGTGAATCTTCCTCTGCTTCTTCCTCCTGCAACCATAAGTCTAATAAAAAGCGAAATGGGTCGGTGCAGGAGCCGGCGGGGTGTACGGATTCCGTCGTGACGGCGGCCGGTGGTGGCCGGAGACAACCTAAAAGGACTAAAGCAGAGAACCCCACTTCAACCGGACATGCAAAGAGGAAGGAGAAACTTGGGGAACGAATAGCAGCGTTACAGGAGCTTGTTTCTCCATTTGGGAAGACAGATACAGCTTCGGTGCTTCACGAGGCAAGGGGATACATAAGGTTTCTACATGACCAAGTTCAGGGGGGCGGAGATAACAAGGGAGACTTGAGGAGCAGAGGGCTGTGTTTGATCCCGGTGGAATCCAGCGTACACGTGGCCAGTAGCAACGGTGCTGATTTCTGGTCCCCTGCTATGGGGAATAATGTTTCGCCATCAAGTAGACAGTGA 858 0.4977 MVHCVGGRNHGFLGPDFSPFLFQSLIQNCLELFRVLGHSYFVSGFYISGMEDNTQEFQGDHLTPLTGFSQLLFGDDDVDHHPPHHHHHSALSCSSLFSIGNTPKILCFGNYQDNNQGEFFVSETNAVTPQKSVITSSESSSASSSCNHKSNKKRNGSVQEPAGCTDSVVTAAGGGRRQPKRTKAENPTSTGHAKRKEKLGERIAALQELVSPFGKTDTASVLHEARGYIRFLHDQVQGGGDNKGDLRSRGLCLIPVESSVHVASSNGADFWSPAMGNNVSPSSRQ 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1672 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Dere10g1672 285 MobiDBLite consensus disorder prediction 178 198 - -
Dere10g1672 285 MobiDBLite consensus disorder prediction 131 164 - -
Dere10g1672 285 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 89 261 - -
Dere10g1672 285 MobiDBLite consensus disorder prediction 266 285 - -
Dere10g1672 285 MobiDBLite consensus disorder prediction 131 198 - -
Dere10g1672 285 Gene3D - 190 250 IPR036638 GO:0046983
Dere10g1672 285 CDD bHLH_AtbHLH_like 194 237 IPR045239 -
Dere10g1672 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 239 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1672 Dere-ChrDere10 29292680 29294822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1672 173 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.512 1.86e-27 107