Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1668 ATGATCACTCAGGAAGATGGAAGAATTGTCATAACAACCGAGAAACAAGCAAGAGAAAATGAAAAACGAGAAGAGTGGCTGAAGCTGAACCTGAGCTTAGGAGGCAGAACTACTACTCCACTATCAACAACAGGAGACCCTGATTCTCAATCATCAAAACCAGCGGCTCCTACCACCAAAGTTTTCTCCTGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGGGGTCATCAGAACGCTCACAAAAGGGAAAGAGGAGCAACTAGAAGATACCAGTCTCACAAGATGATGACGATGATGGGGTTTTCCATTAACTCGCCGTTTTATCGAACACTTGGTGTGCAACCTCATTCTCTTGTGCACAAGCCATCATCAGGCTGGGGTGGAACACCAGTAATGGCAGCGAGCTTTCATGACCTCGGAACGGCATGGGCTTCACCTTTCATGGGGGAAGATCAAAGGTATCTGGTGTGGCCAGGAAGCTTCCGTTTGGATCCACCACAGCAAGCCGAGGCACCTCAAGAATCGCTCAAGCTTGATTTAGACCTCAGACTCTGA 567 0.4744 MITQEDGRIVITTEKQARENEKREEWLKLNLSLGGRTTTPLSTTGDPDSQSSKPAAPTTKVFSCNFCMRKFFSSQALGGHQNAHKRERGATRRYQSHKMMTMMGFSINSPFYRTLGVQPHSLVHKPSSGWGGTPVMAASFHDLGTAWASPFMGEDQRYLVWPGSFRLDPPQQAEAPQESLKLDLDLRL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1668 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 12 188 - -
Dere10g1668 188 MobiDBLite consensus disorder prediction 32 56 - -
Dere10g1668 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Dere10g1668 188 MobiDBLite consensus disorder prediction 31 56 - -
Dere10g1668 188 SUPERFAMILY beta-beta-alpha zinc fingers 59 89 IPR036236 -
Dere10g1668 188 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Dere10g1668 188 Gene3D Classic Zinc Finger 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1668 Dere-ChrDere10 29255730 29256296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1668 60 128 C2H2 Transcription Factor Family AT5G10970 53.165 6.61e-19 80.1