Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1667 ATGGCAGCTGATGCTATTGGCATGGAGGCTTCCTCAGACCAAATGAGTAGTGAAACCAGAAAGTTAACATGTCATAGCCAAAATACCTCAGAACAGCAGCATACAATTGATCCCGGAAATGTCCATTTTGAATTGTCAGAAAAGACCAATCAGATTGGCTCTGAATTTTTGGACAATGAACTTGGCGCTGGGGAATCCAGCTCCCTTATTGATGAAAAATCACCTAAAGTTTCTGACAGTATGACTGAGAATTCCGTCATTCAATTGCCTGGGCAACCTCTATGTGACATAGACAAGAGTTGTCAGACTGGAGAAGGTACATGCTTTCTGCATAAGACCTTAGAAGAGGCTGATGCTCTCGGCATGGAGGCTTCCTCAGATCAAATGAGTAGCCAAAGCGGAAAGCTAGCATACCATAACGACAATACCTCAGAGCAACTGCATACACTTGATCTTGGAACTGCACATTTTGAATTGTCAGAAAAAACTAATCAGATTGGCTCTGAATATTTGGAGAATGAACAAAAGGTCCTTGGCACCAGGGAAACCAGCTCTGTTCTTGATGAAAAATCACCCAAAGTTTCTGACAGTGCGACTGGGAATTCTGTCACTGAACTGCCTGCACGACCTCAATGTGTTGTAGACAAGAGTTGCCAAACTGGAGAAGGTTCATGTTTTCAACATAATATCTTAGAACAGGGCATAGCTATTGGTATGGATGCTTCCTCAGACCATATGAGTGGCAAAACCCGAAAGTTAACATGCCATAACCACAATACTTCAGAACAGCTGCATACACTTGATCCAAGATCTGCCCATTTTGATGTGTCAGAGAAAACTAATCAGATTGGCTCTGAGTTGTTGGACAATGAACAAAGGGTCCTTGGTAATGGGGAAACCAGCTCTCTTCTTGATGAAAAATCACTTAAAGTCTCTGATAGTAGGACCGGAGATTCTGTCATTCAACAGCAAGCACGACCTCAAACTGGAGAAGGTTCAAGCTTTCAGTATAATTCCTTAGAACAGGTTTCTGGTTCTTTATTTAATGATGAATCAGACAACAAACATCAGCTGGCCTCCCAAAGTGTTCAGGATCAACCTGTGGAAAGAAGTGATGCAAATGAACAATTAGATCCACCTTCTGAAGATATTGACAAAGGCAGTAGCCCTGGCTGTTTGCAAAGAAACTCTAAAAGGGAAACTCATGTCCAGTTAGGGTGCAAGCATATTAGAACTTCAAAATCATTGAAGAAAAAATATATGTTCAGAAGTAGTGACAGAGTTTTGCGTTCAAGGATGCTTAAAAAACCTAAACCACCAGAATCGAATACTAATTTAGTTAACGTTGAAAATGATGGAGAAAAGAGAAGAGGAAGAAAGAAGAAGAATGAGGGAAGAGGAGAGAGAGTGGCTGATGAATTCTCAAGAATCAGAGCTCGTCTAAAATATTTCTTGAATCGAGTGAGTTATGAACAGAGCTTGATTGATGCTTATTCTGGTGAGGGCTGGAAGGGATATAGCCTGGAAAAAGTAAAACCTGAGAAGGAGCTTCAACGTGCTAAGTCTGAAATACTTAGGCTTAAATTGAAAATTAGGGATCTGTTTCAACATTTAGATACATTGTGTACTGAAGGGAGGCTTCCACAATCTTTGTTTGATTCCGAAGGAGAAATTTGCAGTGAGGATATATTCTGTGCAAGATGCAAGTCCAAAGACTTGACCACTGGTAATGATATAATACTTTGTGATGGTGCTTGTGACCGTGGATTTCACCAGTTCTGTTTGGAACCTCCATTGTTGTCTGAAAACATTCCACCTGATGATGAGGGTTGGCTATGCCCTGGATGTGATTGCAAAGACGACTGTCTCGGACTTCTTAATGACTCCTTAGGGACAAGGCTCTCTGTTTGTGATGCCTGGGAGAGGGTTTTCCCAGAGGCAGCCACAGCTGCTGGAAATAGAGTGGATGACAACTTGGGACTTCCATCAGATGATTCAGATGATGATGATTATAATCCTGATGTTTCAGAAGATGAGGAGGTAGAAGGAGGCAATTCAAGTTCTGAGGAATCTGAGAATGCTTCTGCTTCTGAAGAAATAGATGCTTCGCGCTGTGAGGATCCATACTTAGGCCTTCCTTCTGATGATTCTGAGGACAATGATTATGATCCCAATGCTGCAGATCATGACCAAGATGTGGCTGAAGAAAGTTCAAGCTCTGATTTCACATCTGACTCTGAGGATCTTGCTGATGTGGTTAATGGTAATGCATTATCCGGACAGGATAATGATCCATTGTCTGCATCATCTTTACTGGAGCTTGATCCTGGTCAAGAAGCTTCCACTCCTGTTACTGTGACAAGACAAATTGAAAGGTTGGACTACCAAAAACTGTATGATGAGACTTACCAAAAGGCTCTGTCGGATACTAGTGATGATGAAGATTGGACTGATAATGCTACTTCAAGTAGGAAAAGGAAATTCAATAGCAAAGGAGCTCCAGTGTCACCAAATGGGAAAGCCTCAATATTGGACCATATTCAGAATGCAGCTGCACATACTCCTAGGAAAAATACTCGTCAAAAAAATGTTGAAAATATGGATAATTCACCCAATATATCACTTGAAGACTCTAAGAGCGCTAGTTCAAATGATAAAAAACTTGGATCTTCAACTTACAAAAGACTTGGGGAAGATGTAGTTAAGGTGCTTTACAAAAAATTCAAAGAAAATCAGTACCCAGACAGAGCCACAAAAGAAAGCTTGGCACAAGAACTTGGACTTACTTTCCAGCAGGTTAGCAAATGGTTTGAGAATGCTCGTTGGAGCTTTCGGAATTCATCACGTATGGAAGCCAGCGCATGTAAAAATGCTTCACAGCCGGCCACTTCCAGCAGAGTTGAAATTGAGGTAGCACTTGGTGATGAGAAGAGAGACTCTAAATCAGGATCCCAGGAGGGAAATGTACATAAATCAAAATCCTCAAGCTCTAGAAAAAGGAAGCATACAACAGATACGGAGGAATCGATTGCGAATATGGACATTGATAGTGCAGCAACAAATCCTCCTGCTGGCTCACCTAGAGTTAGTGAATTGCAAATAAGTGAAAAAATAAAAACAAGGAAAAGAAAATGA 3135 0.4115 MAADAIGMEASSDQMSSETRKLTCHSQNTSEQQHTIDPGNVHFELSEKTNQIGSEFLDNELGAGESSSLIDEKSPKVSDSMTENSVIQLPGQPLCDIDKSCQTGEGTCFLHKTLEEADALGMEASSDQMSSQSGKLAYHNDNTSEQLHTLDLGTAHFELSEKTNQIGSEYLENEQKVLGTRETSSVLDEKSPKVSDSATGNSVTELPARPQCVVDKSCQTGEGSCFQHNILEQGIAIGMDASSDHMSGKTRKLTCHNHNTSEQLHTLDPRSAHFDVSEKTNQIGSELLDNEQRVLGNGETSSLLDEKSLKVSDSRTGDSVIQQQARPQTGEGSSFQYNSLEQVSGSLFNDESDNKHQLASQSVQDQPVERSDANEQLDPPSEDIDKGSSPGCLQRNSKRETHVQLGCKHIRTSKSLKKKYMFRSSDRVLRSRMLKKPKPPESNTNLVNVENDGEKRRGRKKKNEGRGERVADEFSRIRARLKYFLNRVSYEQSLIDAYSGEGWKGYSLEKVKPEKELQRAKSEILRLKLKIRDLFQHLDTLCTEGRLPQSLFDSEGEICSEDIFCARCKSKDLTTGNDIILCDGACDRGFHQFCLEPPLLSENIPPDDEGWLCPGCDCKDDCLGLLNDSLGTRLSVCDAWERVFPEAATAAGNRVDDNLGLPSDDSDDDDYNPDVSEDEEVEGGNSSSEESENASASEEIDASRCEDPYLGLPSDDSEDNDYDPNAADHDQDVAEESSSSDFTSDSEDLADVVNGNALSGQDNDPLSASSLLELDPGQEASTPVTVTRQIERLDYQKLYDETYQKALSDTSDDEDWTDNATSSRKRKFNSKGAPVSPNGKASILDHIQNAAAHTPRKNTRQKNVENMDNSPNISLEDSKSASSNDKKLGSSTYKRLGEDVVKVLYKKFKENQYPDRATKESLAQELGLTFQQVSKWFENARWSFRNSSRMEASACKNASQPATSSRVEIEVALGDEKRDSKSGSQEGNVHKSKSSSSRKRKHTTDTEESIANMDIDSAATNPPAGSPRVSELQISEKIKTRKRK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1667 1044 MobiDBLite consensus disorder prediction 653 786 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 1 39 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 805 892 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 347 370 - -
Dere10g1667 1044 ProSitePatterns 'Homeobox' domain signature. 922 945 IPR017970 GO:0000981|GO:0006355
Dere10g1667 1044 Coils Coil 517 537 - -
Dere10g1667 1044 Gene3D - 890 959 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 864 890 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 179 202 - -
Dere10g1667 1044 SMART HOX_1 889 951 IPR001356 GO:0003677
Dere10g1667 1044 MobiDBLite consensus disorder prediction 662 686 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 737 786 - -
Dere10g1667 1044 Pfam Homeodomain 898 942 IPR001356 GO:0003677
Dere10g1667 1044 MobiDBLite consensus disorder prediction 314 335 - -
Dere10g1667 1044 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 347 1009 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 970 986 - -
Dere10g1667 1044 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 518 624 IPR013083 -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 10 39 - -
Dere10g1667 1044 SUPERFAMILY FYVE/PHD zinc finger 554 622 IPR011011 -
Dere10g1667 1044 CDD PHD_PRHA_like 564 616 IPR045876 -
Dere10g1667 1044 FunFam Homeobox protein HAT3.1 545 622 - -
Dere10g1667 1044 CDD homeodomain 895 948 IPR001356 GO:0003677
Dere10g1667 1044 Pfam PHD-finger 564 619 IPR019787 -
Dere10g1667 1044 ProSiteProfiles Zinc finger PHD-type profile. 562 619 IPR019787 -
Dere10g1667 1044 ProSitePatterns Zinc finger PHD-type signature. 565 616 IPR019786 -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 955 1044 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 298 335 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 806 825 - -
Dere10g1667 1044 ProSiteProfiles 'Homeobox' domain profile. 901 947 IPR001356 GO:0003677
Dere10g1667 1044 MobiDBLite consensus disorder prediction 347 404 - -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 427 469 - -
Dere10g1667 1044 SMART PHD_3 564 617 IPR001965 -
Dere10g1667 1044 SUPERFAMILY Homeodomain-like 894 950 IPR009057 -
Dere10g1667 1044 MobiDBLite consensus disorder prediction 450 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1667 Dere-ChrDere10 29240749 29245930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1667 373 944 Homeobox Transcription Factor Family AT3G19510 45.455 3.95e-132 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Dere10g1667 PHD 1.2e-10 CL0390