Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1663 ATGACACTGAAGAATCTCCGTAGCCGTCTATACTCTGGACGTTCGACCCAACCAACCACCGATAACCATCCATCGCAGAGCCTTCAACCAGAATTATCAAGTTTTCTTGTTCGCCTCCATCGGCTGCGCTGCTCTGTCAAGTCTCACACTTTCCAACTGCACAATCGCCCTTTGCCTTATATCAACGCTTCCTACGTCCTTCGTTTTCTCGCAGATCTTCTCTTCATATTCGAATTATGGTTTCATTTTGTAATTAATGAATATCTGTGGTGCGTGAATAGGAAAAGGACGGCGTGGTTAAGGATGTTTGAAACTGCAGAAGAAGCAACTAGAGCATATGATGAAGTAGCCATTTTGATGAGCGGTATAAATGCCAAAACAAACTTCCCTGTGGCCACCAATAATGACAGTTATAATAATAATAATAATAATAATTACATGGGAAATCACCATTCTTCTTCTTCTTCTTCCTCAACTGTCTCAGAAGCTCTCAGTGCAAAGCTTCGAAAGTGCTGTAAATCCCTATCGCCATCTCTCACCTGTTTAAGGCTCGACACACACAGCATCAGAGTGTGGCAGAAGCCAGCAGGGCCTTGCTCTGACTCCAACTGGGTCATGATGGTGGAGTTGGAAAGGAAGAATGTTGGAGGTTCCGAGACCACGTTGGAATCGCTAGTGCCGGATACGTCGACGGAGAAGTTGAAACCAGAAAAAGGGAATGAACTCAGCCTCAAGCTTCAGCAGAAGTTGGCCATTCCTAGTTCACAACCACCAGTGGCATTACCCACAGCTCCACCTTCATCAGAAACCAAAAGGAAAAGCAGAGTATTGTCTCTGATTGACTATGGAGGAGACCCAACAGGTGTGGAAGAGAGCAGTGATGCGTTTGTGAAAGCTTTGGAGGAAGTTTATGGAGTGGAGAACAATGGAGCTGAATAG 939 0.4515 MTLKNLRSRLYSGRSTQPTTDNHPSQSLQPELSSFLVRLHRLRCSVKSHTFQLHNRPLPYINASYVLRFLADLLFIFELWFHFVINEYLWCVNRKRTAWLRMFETAEEATRAYDEVAILMSGINAKTNFPVATNNDSYNNNNNNNYMGNHHSSSSSSSTVSEALSAKLRKCCKSLSPSLTCLRLDTHSIRVWQKPAGPCSDSNWVMMVELERKNVGGSETTLESLVPDTSTEKLKPEKGNELSLKLQQKLAIPSSQPPVALPTAPPSSETKRKSRVLSLIDYGGDPTGVEESSDAFVKALEEVYGVENNGAE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1663 312 SUPERFAMILY DNA-binding domain 93 131 IPR016177 GO:0003677
Dere10g1663 312 Gene3D AP2/ERF domain 80 132 IPR036955 GO:0003700|GO:0006355
Dere10g1663 312 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 94 233 - -
Dere10g1663 312 MobiDBLite consensus disorder prediction 253 274 - -
Dere10g1663 312 SMART rav1_2 82 136 IPR001471 GO:0003700|GO:0006355
Dere10g1663 312 MobiDBLite consensus disorder prediction 1 28 - -
Dere10g1663 312 ProSiteProfiles AP2/ERF domain profile. 41 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1663 Dere-ChrDere10 29182847 29184297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1663 95 210 AP2-EREBP Transcription Factor Family AT1G15360 63.866 1.77e-33 120