Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1660 ATGATGCTTCGATTGTGCTACAGGCCGCTGGAGCGTTGCTTTGGATGGCGGAGTTGTGGTGGAGGCAGCGGCGGAGATGGACTTCTGTGGCACACGGACTTGAAGCCCCACGCCTCTGGCTACTTCTCCATCGCCGTTGCTCAAGCCAATTACAGTCTCGAGGATCAGAGCCAAGTCTTCACGTCTCCGCTCGCCACCTACATCGGCGTCTATGATGGCCACGGCGGGCCTGAAGCCTCTAGATTCGTCAACAAACGTCTCTTCCCTCACTTGCAGAAATTTGCTTCTGAACAAGGGGGATTGTCAGTGGATGTGATAAAAAAAGCGTTTAAGGCCACTGAGGAGGAGTTTTTACTTTTGGTGAAGCGGTCACTGCCTGTATGTCCCCAAATTGCTTCAGTAGGATCATGCTGTCTTCTCGGTGCAATTTCTGATAATGTATTATATGTTGCAAACCTTGGAGATTCTAGAGCTGTTCTTGGCCGCAGAGATTCAGAGAGCAAGAAATATCCAGTGGTGGCAGAGCGGCTATCAACTGATCATAATGTGGCTGTTGAGGAGGTGAGGAGGGAGGTGGAAGCCCTCCATCCTGATGATTCACACATTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCTATTGGTGATGTGTATCTTAAGAGACCTGACTTTTACAGAGACCCAATCTTTCAGCAATTTGGAAACCCAGTTCCTCTGAAGCGTCCTGTAATGACAGCTGAACCATCAATTCTTATTAGGGAGCTTGAGCCAGAAGATTTATTCCTGATATTTGCATCAGATGGCCTCTGGGAACAATTAAGTGATGAAGCAGCAGTTGAGATTGTTTTCAAGCACCCTAGAGCTGGAATCGCCAAGAGATTGGTAAGAGCTGCTCTACAGGAAGCTGCAAAGAAGAGAGAGATGAGATATGATGATATAAAGAAAATTGACAAGGGAATAAGAAGACATTTCCATGATGATATCACTGTTATTGTTATCTATCTTGATCACCAGCAAGGCTCCCCTAATGACAGATTCAAACCAAGTGCTGTTGGCTGCACGAGTGCCCCTGTGGATATTTTCTCCCTTAATGCAGATGAAGCAGAACAGAGCATGCTTGGTTCAGCTGCCTAA 1158 0.468 MMLRLCYRPLERCFGWRSCGGGSGGDGLLWHTDLKPHASGYFSIAVAQANYSLEDQSQVFTSPLATYIGVYDGHGGPEASRFVNKRLFPHLQKFASEQGGLSVDVIKKAFKATEEEFLLLVKRSLPVCPQIASVGSCCLLGAISDNVLYVANLGDSRAVLGRRDSESKKYPVVAERLSTDHNVAVEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFQQFGNPVPLKRPVMTAEPSILIRELEPEDLFLIFASDGLWEQLSDEAAVEIVFKHPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHQQGSPNDRFKPSAVGCTSAPVDIFSLNADEAEQSMLGSAA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1660 385 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Dere10g1660 385 Gene3D - 33 351 IPR036457 -
Dere10g1660 385 ProSiteProfiles PPM-type phosphatase domain profile. 38 343 IPR001932 -
Dere10g1660 385 PANTHER PROTEIN PHOSPHATASE 39 342 IPR015655 GO:0004722|GO:0006470
Dere10g1660 385 FunFam Probable protein phosphatase 2C 42 32 351 - -
Dere10g1660 385 CDD PP2Cc 54 343 IPR001932 -
Dere10g1660 385 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Dere10g1660 385 SUPERFAMILY PP2C-like 43 345 IPR036457 -
Dere10g1660 385 SMART PP2C_4 31 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1660 Dere-ChrDere10 29176830 29179330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1660 26 349 PP2C-type Phosphatase Gene Family AT3G51370 59.337 2.44e-146 418