Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1652 ATGAGCTGCAACGGTTGTCGTGTGCTCAGAAAAGGCTGCAGTGAGGAGTGCATGCTCCGACATTGCCTTCAGGGCATAGAAAGCCCACAGGCCCAAGCCCATGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGTGCCGCCCTCATGTCCTTCGTCTCCGCCGTACCCACCCACCAGAGAGCCGCTTTGTTTCGATCACTTCTGTACGAAGCAGTGGGACGTACCATATATCCGGTGAACGGAGCGGTAGGCCTACTCTGGACCGGCAATTGGCACCTGTGCCAGTTAGGAGTCGAGAAAGTGCTCCACGGCGGCGCGTTGACTCCACTGCCCGACTTCTCCGGTGGATATTCGGTCACTGCGGCCGCGGAGGAGGACGACGGATTCGGATCCGTCCTAGACTGCTCTAGCCAGCGAGACAATACGGGTTTGGGATCAAGGAAGCTAAAGAGAAAGGTTCGTCGTGACGACGTCGTGTTGGAGAATTTTCAAGCGCGAAACGTTGACCAGTACCGCTTGGGGAGATCGGGCTCGCCGGAGAAAGTGGTGGTTGGCGGCGGAGGAGGAAGGAGTTATCTAGCGAAGGATGATGGACGAGCTGCAACGCCCTCCGAGGAATCCGAAACGTCGACGTTAGGAAGCAGCGCACCGGCACCGCACTGTGGTATTACTGAAAGGAAGCTCCTTAGACTTTTCTTCTAG 702 0.5741 MSCNGCRVLRKGCSEECMLRHCLQGIESPQAQAHATVFVAKFFGRAALMSFVSAVPTHQRAALFRSLLYEAVGRTIYPVNGAVGLLWTGNWHLCQLGVEKVLHGGALTPLPDFSGGYSVTAAAEEDDGFGSVLDCSSQRDNTGLGSRKLKRKVRRDDVVLENFQARNVDQYRLGRSGSPEKVVVGGGGGRSYLAKDDGRAATPSEESETSTLGSSAPAPHCGITERKLLRLFF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1652 233 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Dere10g1652 233 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Dere10g1652 233 MobiDBLite consensus disorder prediction 184 219 - -
Dere10g1652 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1652 Dere-ChrDere10 29088386 29089978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1652 1 154 AS2 family AT3G49940 58.974 2.45e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere10g1652 LOB 1.1e-24 No_clan