Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1628 ATGTCTAGCTCGCCGGACGACCATTCCGCCTTCGGTAGCTTGTTATGCGGAGAGGATGCCGGTGAAGTAATCTCCGGCGACCACCCTTCGTCGTCGTCGTACCTGTCTCCGTATTCTCTGCCGTCAGACGAGGCGACCATCGGCGAGCTCATCGACGTTGAGACTCATCACATGCCCGACGCAGATTACTTACAGCGCTGTCGTTATCGTTTAATCGACGTCGCCGCTCGCCAAGACTCTATCAATTGGATCTTAAAGGTTCACGCATATTACAAGTTCCGTCCAGTAACGGCGTTCCTCTCTGTCAACTACCTCGATCGTTTCCTGTCTTGGTCTTCACTTCCGCGACAATGTGGATGGGCGTTTCAGCTGCTATCAGTGGCGTGCTTGTCTTTAGCGGCGAAAATGGAGGAACCCGAAGTGCCTCTGTTGCTGGACCTCCAGTTGTTCGAACCCAGATTCGTATTTGAACCCAAGACGATTCAACGAATGGAGCTTTGGGTCATGGCCAATCTACGGTGGCGATTACGCTCCGTAACCCCCTTCGATTACCTCCACCAGTTCATCTCTGAGCTCCTTTCCAACTCCGACCCACAACCCGAATCCATAACCCGGTTCTTCTCTGTTGCTACCGACCTCATCCTCAGCACCACCCGCGTTATTGATTTCTTGGGTTTTGCACCGTCGACCATAGCAGCCGCCGCCGTGCTCTGTTCAGCCGGTCGTAGCCAATCGCCGCCGTGCTTTCATGAGAGAGTAAACAAAGAAATGGTAAGAAGCTGTCACCAACTAATGGAGGAGTATGTGGTGGACACGTGTCCCTCAGCCGGCTATAAATGCGTTCAAGCCGAGCTGGCCCCGCCTTCGAGCCCGTCCGGCGTACTCGACGCTGCTACCACGTGTGTAAGCTGCGACACTCGCTCCGAGAACCCAGGCTCAAGCAGTCGACCCGAGCCTCCCAACAAGCGGCTGCGATCTTCGGCTCCTGATGTGCAATAG 999 0.5485 MSSSPDDHSAFGSLLCGEDAGEVISGDHPSSSSYLSPYSLPSDEATIGELIDVETHHMPDADYLQRCRYRLIDVAARQDSINWILKVHAYYKFRPVTAFLSVNYLDRFLSWSSLPRQCGWAFQLLSVACLSLAAKMEEPEVPLLLDLQLFEPRFVFEPKTIQRMELWVMANLRWRLRSVTPFDYLHQFISELLSNSDPQPESITRFFSVATDLILSTTRVIDFLGFAPSTIAAAAVLCSAGRSQSPPCFHERVNKEMVRSCHQLMEEYVVDTCPSAGYKCVQAELAPPSSPSGVLDAATTCVSCDTRSENPGSSSRPEPPNKRLRSSAPDVQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1628 332 SMART cyclin_7 82 170 IPR013763 -
Dere10g1628 332 MobiDBLite consensus disorder prediction 305 332 - -
Dere10g1628 332 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Dere10g1628 332 Gene3D - 60 177 - -
Dere10g1628 332 SUPERFAMILY Cyclin-like 47 176 IPR036915 -
Dere10g1628 332 Pfam Cyclin, C-terminal domain 179 269 IPR004367 -
Dere10g1628 332 CDD CYCLIN_AtCycD-like_rpt2 179 265 - -
Dere10g1628 332 Gene3D - 49 252 - -
Dere10g1628 332 FunFam D2/4-type cyclin 60 175 - -
Dere10g1628 332 MobiDBLite consensus disorder prediction 305 321 - -
Dere10g1628 332 Pfam Cyclin, N-terminal domain 50 176 IPR006671 -
Dere10g1628 332 PANTHER CYCLINS 52 271 IPR039361 -
Dere10g1628 332 FunFam D6-type cyclin 176 263 - -
Dere10g1628 332 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
Dere10g1628 332 SMART Cyclin_C_2 179 303 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1628 Dere-ChrDere10 28833899 28835644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1628 14 272 Core Cell Cycle Gene Families AT1G70210 45.353 5.92e-70 219