Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1623 ATGGCTACTCACTGCAAGTGTATTACAATGTTTTGGTGCTTACTTCTTCTTCTTCTCTCAAACTCTGTTTCTTCCCAAACCATTGTGAAGAGCTTACCTGGCTTTTCAGGCGACCTACCCTTCCTGCTTGAAACAGGATATATAGGGATAGGGGAAGTGGACGAGATTCAGCTATTTTATTACTTCTTCCAGTCAGAGCAGAAGCCATCAGATGACCCTCTTGTGCTTTGGCTTCCCACTGCCCCTGGTTGTTCTGCTCTCTCTTCCATCTTCTATGAAATTGGTCCATTAGCTTTCAATTATGAGAAATCCAGTGGGGGACACAAACCAGTTTTAGAGCTGAATGAGTACTCTTGGACTAAGGTTGCCAACGTAATCTTCCTGGATTCACCCGTGGGCACTGGATTTTCATATTCAACAACTTCTCAAGGATACAACACCAGTGACACAAAAACAGTTGCAAACATTTATGAGTTTATTAGAAAGTGGTTGATGATTCATCCTCAATATCAGAACAATCAACTCTTAATTGGTGGAGAATCTTATTCTGGCATCATTGTTCCAGCCCTTGTCCAGGAAATTTTAGATGGTAAAGAAGCTGGAAACTTTCCCGTATTAAATGTCAAAGGATATGTTCTGGGAAACCCATTCACTGATGTGTACTACGATGTAAATTCAAGAGTTCAATATGCACATAGAGTTGCACTTCTTTCCGATGATCTCTATGAGGAAGCTAAAATCCAATGTGATGGAGATTATTTGCACCCAAATATAAGTGAAACTGCTTGTATTGAAGATCTTGAGATAATCCATCAGTGTTTGGAAGACATAAATGCAGCGATGATATTGGAAGCAAAGTGCAGTGCCTTCACTCCAAAACCACATAGCCCAAAGTGGGGTTTAAGCCCTATTGGACTTAATCTCTCAGATTCACTCATTTTAGAGGCCAATCCCATTACTTATTCAACGTATTGCAGGAACTATAACTATTTGTTCGTGAACATATGGGCAAATGACATAGCAGTACAGGAAGCTTTGAATGTTAGAAATGGAACTATAAAAGAGTGGGAGAGATGCAATAAGAATTTGTCTTACACATTTGACATAAAAAGCAGTCTTAAGTATCACCAAAACTTCGCCATTAATGCAGACCTCCGAGCTCTGATTTACAGTGGAGATCATGATCTTATCATTCCACATGTGGGTACAGAGGCATGGATTCAAACTTTGAATTTGAGTCTTTCTTCTTCTAATGAGTGGAGGCCATGGTATGCTGATGGACAAGTTGCAGGGTATACAGAGATGTACAAAAATGAAAAGTTCAGTATGACATTTGCAACAGTGAAGGGAGCAGCGGTTAGTACCGAAAAACGAATCTCAGACAGCGAGGCGAGGGTGAGGGTAAGCTGGTTAGCCACTGCTTCTGCTTCCTCCGGAAGCTTCAAATGCCAGTTTTGTGGTTCCTAA 1467 0.4083 MATHCKCITMFWCLLLLLLSNSVSSQTIVKSLPGFSGDLPFLLETGYIGIGEVDEIQLFYYFFQSEQKPSDDPLVLWLPTAPGCSALSSIFYEIGPLAFNYEKSSGGHKPVLELNEYSWTKVANVIFLDSPVGTGFSYSTTSQGYNTSDTKTVANIYEFIRKWLMIHPQYQNNQLLIGGESYSGIIVPALVQEILDGKEAGNFPVLNVKGYVLGNPFTDVYYDVNSRVQYAHRVALLSDDLYEEAKIQCDGDYLHPNISETACIEDLEIIHQCLEDINAAMILEAKCSAFTPKPHSPKWGLSPIGLNLSDSLILEANPITYSTYCRNYNYLFVNIWANDIAVQEALNVRNGTIKEWERCNKNLSYTFDIKSSLKYHQNFAINADLRALIYSGDHDLIIPHVGTEAWIQTLNLSLSSSNEWRPWYADGQVAGYTEMYKNEKFSMTFATVKGAAVSTEKRISDSEARVRVSWLATASASSGSFKCQFCGS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1623 488 Gene3D alpha/beta hydrolase 26 455 IPR029058 -
Dere10g1623 488 FunFam Serine carboxypeptidase-like 19 22 293 - -
Dere10g1623 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 451 IPR001563 GO:0004185|GO:0006508
Dere10g1623 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Dere10g1623 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Dere10g1623 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Dere10g1623 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Dere10g1623 488 SUPERFAMILY alpha/beta-Hydrolases 29 451 IPR029058 -
Dere10g1623 488 Pfam Serine carboxypeptidase 33 452 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1623 Dere-ChrDere10 28770009 28783103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1623 336 462 Calmodulin-binding Proteins AT2G22960 48.819 1.04e-34 126