LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere10g1622	ATGAGGGGAAATCTTCGCGATCCGTCAAAATCTGCACACGAAGATGACCCGGATGTAGCCCGACCCCCCGGAGGCCTCTCCGTCGCCGGCGGGCTTCGCAAGAAGGGCACCGGCGTCAGAGCGTGGCTTCTAATTGACGCCACGGGGCAGACGCAAGTGGTGGAGGCCGGCAAGCACGCCATCATGCGCCGGACGGGTCTACCCGCCCGAGACCTTCGGATCCTGGATCCGCTCCTGTCCTACCCTTCCACGGTTCTGGGGCGTGAGAGAGCGATCGTGATAAATTTGGAGCACATAAAAGCGATAATCACTGCGCAAGAAGTTCTGTTGCTGAATTCGAGGGACCCATCCGTGACCCCTTTTGTTGAGGAGTTTCAGCGAAGAATTCTTCATCACTACCAAGCCACTAAGGCTCAGGAGGGAAATGGCGATGATTCGAATTGGACAAAATTGTATGATTTGGAAGAGCCACAATCTAGGACTGTTAGTCCTCAAAATCAAGATGGGGAAAATAAAGCAGAAGGGAAGCAAGAGTTCCAGAATAGAGATGGGATGAAAGTTCCTCCATTTGAATTTGTAGCATTGGAAGCATGCCTTGAGGCTGCTTGTGGAGTCTTAGAAAATGAGGCAAAGACATTGGAGCAGGAGGCTCATCCTGCCTTAGATAAGCTGACTTCAAAGATTAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAAAGCCGCCTGGTTGCAATTACTGGTCGAGTTCAAAAGGTAAGGGATGAATTAGAGCACTTGTTAGATGATGATGAAGATATGGCTGATATGTATCTGACAGACAAGTTGGTTCAGCAACAGCTTGAGGATTCTTCTAACTCATCCATAAATGATGGGAATATCGTGGATGATCAAGTTCTTCAACCTGATATGGAAGACAGGATGCCTCCTGAAATATCATTGGAAACTGGTGGAGGTTTTGTTCGTTATGAAGATCATCAGAATGCACTTGGCAGGGATAGCCATGGAACCCGTACTAGCACTACCTACAGTGCTGTAACCAAGCAACTTGATGTAGAAGAACTTGAGATGCTCTTGGAAGCATACTTTGTGCAAATTGATGGCACACTGAACAAACTGTCCACGCTGAGGGAGTACGTTGATGACACCGAGGACTACATCAATATAATGCTGGATGACAAGCAGAACCATCTGTTGCAAATGGGAGTGATGCTGACTACGGCAACTCTGGTAGTGAGTGCTTTCGTTGTCGTGGCTGGTATCTTTGGGATGAACATTCATATTGATCTTTTTGATGAACATATAGCTGGGATGCGAGAATTCCTCTGGACTGTTGGTGGCAGCACCGCTGGCACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGTAAGCACAAACGCCTGCTGGAGTAA	1413	0.4791	MRGNLRDPSKSAHEDDPDVARPPGGLSVAGGLRKKGTGVRAWLLIDATGQTQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVEEFQRRILHHYQATKAQEGNGDDSNWTKLYDLEEPQSRTVSPQNQDGENKAEGKQEFQNRDGMKVPPFEFVALEACLEAACGVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMADMYLTDKLVQQQLEDSSNSSINDGNIVDDQVLQPDMEDRMPPEISLETGGGFVRYEDHQNALGRDSHGTRTSTTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIDLFDEHIAGMREFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE	470

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere10g1622	470	Gene3D	Magnesium transport protein CorA, transmembrane region	158	398	-	-
	Dere10g1622	470	Gene3D	-	31	113	-	-
	Dere10g1622	470	MobiDBLite	consensus disorder prediction	1	20	-	-
	Dere10g1622	470	Coils	Coil	196	216	-	-
	Dere10g1622	470	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	27	469	IPR039204	-
	Dere10g1622	470	MobiDBLite	consensus disorder prediction	157	181	-	-
	Dere10g1622	470	Pfam	CorA-like Mg2+ transporter protein	354	457	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Dere10g1622	470	CDD	Mrs2_Mfm1p-like	42	468	IPR039204	-
	Dere10g1622	470	FunFam	Magnesium transporter MRS2-1	30	113	-	-
	Dere10g1622	470	MobiDBLite	consensus disorder prediction	1	30	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere10g1622	Dere-ChrDere10	28766606	28769935	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere10g1622	42	470	MRS2 Gene Family	AT3G19640	68.337	0.0	580