Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1594 ATGAATTTAACCGACGACGAGAACGTATCTAGCGCCGACATTAACCAATTCAACCAGTCGTTGTTCAGATTGTTGGGCGATTTGGAAACTCAAGCTGCAAATTCGGAGACGGAGAAGAAATTCGCCACAGGGGAAGTGAAGGTGACGAGCTCGATGACGGTTTATGGGCTAGTGCAATGCTCGATGGATTTGACCACTGGACAATGTGAGACGTGTTTGCAGAATGCCGCCGGAACTCTTCCGACGTGCTGTGGGGGAAAACAAGGCGCGAGAGTCCTGCTTGCGCCCTGTAATGTGAGATACGAGATGTTCCGATTTTACAATGATACCAATTCGTTATCTCCCCCTGCGACTTCTGGAAAGAAGAAATTTGGTGGAGGAACAATTGCCATGATTGTTATCCTTGTCATTGCTTTCTTAATTCTCCTATGTTTAGGCTGCTATTTCCTGCTGAGAAGGTCAAGGAAGAGTTATAGGACTATTTTAAGAGAAAATTTTGGAAAGGAAAGTGCCACTTTGGAGTCGTTGCAATTCAATTTGGCTACAGTTGAAGCAGCAACAAACAAATTTTCCCACCAGCACAAGATAGGCCAGGGTGGATTTGGAGAAGTTTTCAAGGGTGTTCTTCCAGATGGACGAGAAATAGCTGTAAAAAAACTCTCGAAAGGTTCTGGGCAAGGTTCAGTAGAATTCAAGAATGAGATTTTACTCATAGCCAAACTTCAACACAGGAATCTAGTGGCCTTGCTAGGCTTTTGCTTGGAAGCAGAAGAGAGAATGCTTATTTATGAATATGTGCCCAACAAAAGTCTTGATCACTTTATATTTGATTCCCAAAAGAGAAGACTACTTGATTGGGTTCAGCGTTACAAAATCATAGAAGGAATTGCACGAGGAATTCTCTATCTACATGAGCACTCAAGACTCAAAGTTATACACCGTGATCTTAAACCTAGCAATGTGTTGCTAGATGACAATATGAATCCAAAAATCTCAGATTTTGGTTTAGCAAGGATGATTGCTATAGATCAAGACCAAGGAAGAACAAGACGAATAGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCTGAAAAGTCAGATGTATTTAGTTTTGGAGTCATAACTTTGGAGGTTATTAGTGCAAAAAGGAATGCTCGTTCTCTTGAGTCACAGAATGTTGATGATCTCTTGAGTCATGCTTGGAGACAATGGAAGGATCAAACACCATTAGAAATATTGGACCCAGGTCTAAAGGAAGCTTGCCCACATAGCGAAGTCATTAAGTGCATTCAAATTGGTTTACTAAGCGTCCAAGAAAATCCAAATGATAGACCTACGATGGCAAAAATTGTTTCATATCTTAGTAGCCCTTTAGACGAATTGCCCGTTCCTCGAGAACCAGCATTTTTGATGCGCAATGGAATAGTGATAAACTCGGCGGCAGGGGAATCTAGTTCAGGCTCTAAATCGTTATACTCGGTGAATGATTTAACAATGAGCAATTCTTTCCCTCGGTAA 1539 0.4133 MNLTDDENVSSADINQFNQSLFRLLGDLETQAANSETEKKFATGEVKVTSSMTVYGLVQCSMDLTTGQCETCLQNAAGTLPTCCGGKQGARVLLAPCNVRYEMFRFYNDTNSLSPPATSGKKKFGGGTIAMIVILVIAFLILLCLGCYFLLRRSRKSYRTILRENFGKESATLESLQFNLATVEAATNKFSHQHKIGQGGFGEVFKGVLPDGREIAVKKLSKGSGQGSVEFKNEILLIAKLQHRNLVALLGFCLEAEERMLIYEYVPNKSLDHFIFDSQKRRLLDWVQRYKIIEGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARMIAIDQDQGRTRRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVITLEVISAKRNARSLESQNVDDLLSHAWRQWKDQTPLEILDPGLKEACPHSEVIKCIQIGLLSVQENPNDRPTMAKIVSYLSSPLDELPVPREPAFLMRNGIVINSAAGESSSGSKSLYSVNDLTMSNSFPR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1594 512 ProSiteProfiles Protein kinase domain profile. 190 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1594 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Dere10g1594 512 FunFam Cysteine-rich receptor-like protein kinase 10 1 106 - -
Dere10g1594 512 SUPERFAMILY Protein kinase-like (PK-like) 174 478 IPR011009 -
Dere10g1594 512 ProSiteProfiles Gnk2-homologous domain profile. 1 106 IPR002902 -
Dere10g1594 512 Gene3D Phosphorylase Kinase; domain 1 153 265 - -
Dere10g1594 512 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
Dere10g1594 512 Gene3D - 2 106 IPR038408 -
Dere10g1594 512 Pfam Protein tyrosine and serine/threonine kinase 192 461 IPR001245 GO:0004672|GO:0006468
Dere10g1594 512 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 151 265 - -
Dere10g1594 512 CDD STKc_IRAK 196 461 - -
Dere10g1594 512 Pfam Salt stress response/antifungal 13 102 IPR002902 -
Dere10g1594 512 Gene3D Transferase(Phosphotransferase) domain 1 266 468 - -
Dere10g1594 512 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 507 - -
Dere10g1594 512 FunFam cysteine-rich receptor-like protein kinase 10 266 468 - -
Dere10g1594 512 SMART serkin_6 190 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1594 Dere-ChrDere10 28398005 28400981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1594 3 512 Receptor kinase-like Gene Family AT4G05200 46.717 9.14e-171 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g1594 PK_Tyr_Ser-Thr 1.1e-48 CL0016