Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1591 ATGGCTTCCCACAAACTTTTCTTACTCTTCTTCTTTGTTGGCTTCCTCTGTTCTGCAACTACTGAAGCAGCTGAACCTAATCATCTTTTCCACAACTGCTCTGCCAGCAAAACCTTCACAGCCAATAGTGCCTTCCAATTGGACCGAAACACGCTATTCTCTTTCTTAGTTTCCAACGCCACCGGCAACACCGAGTACTACAACACCACTGTCGCCGGCGGCGGCGAAACCGTCTACGGCTATTTCATGTGCCGGGGTGGCGTCCTCCTTGCGGACTGCCACCAATGTGTCATTGACGCAACCAGAAAATTGAGCTCCGAGTGCCCATTCTCGAAGGAGGGCGTAACCTGGTACGACGAGTGCTGGCTTCGCTATTCCGACCACTCTTTCTTCTCCACCGTCGACACAAGGCCTAGACACTGCCTCGCGAACCCCTTCAATGTCTCCGACCCTGTAAACTTCATGCGTTCTTTGTTCAATATTTTGAACGAGACGGCAGATAGGGCGGCGAAACCTGCTGCGGGGAAATGGAAGTTTGCGACGAAGCAAGTGAATATTTCAGGGTTTCAGACACTGTATTGTCTTGCTCAGTGCACACCGTACCTTTCACCCCAAGATTGCAGAAGGTGTTTGAGTGGTGTGATTGGGGACCTTCCATGGTGTTGTGAGGGAAGGCGAGGAGGAAGAGTTCTATACCCCAGTTGTTTCGTTAACTATGAATTTTATCCTTACTTTCAAGCAGAAGCTCCACCGCCAACTCCTGCACTCCCTACAATTGTTCCTCCTGCAAATACTGCTAATTCCCAAGGTAAAGTTCTTACCTATATGTTTGAAGGAAAAAGTGGGATCTCATCGGGGACGATTGTTGCGATTGTGGTTCCAATTTCAGTGGCTGTGCTGCTGTTTATAGTGGCCGTTTGTTACGTGCGTAGAAGAACAAGGAAGAAGTATGACTCTGTACCCGATGGAAAATCTGCAAATGACATGAGCACTGTGGACTCACTGCAATTTGATTTTAGTACAATTGAAGCAGCCACAAACAAGTTCTCTGCAGATAACAAGCTAGGTGAAGGTGGATTTGGGGAGGTTTACAAGGGCACGCTTCTGAACGGACAGGAAATAGCTGTCAAGAGACTCTCCCAAGGCTCTGGACAAGGAGGAGAAGAATTTAAGAATGAAGTAGTGGTGGTTGCGAAGCTACAACACAGGAATTTAGTAAGGCTTTTGGGGTTCTGCTTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTGCCCAACAGAAGTCTTGATTATATTCTCTTTGATCCTAAAAAGCAAAAACAGTTGGATTGGGCAAAACGTTATAAGATTATTGGAGGAATTGCTCGAGGCATTCAGTATCTTCATGAAGATTCAAGACTTAAAATTATACATCGTGATCTTAAAGCTAGCAACATATTGTTGGATGGTGATATGAATTCAAAAATTTCAGATTTTGGCATGGCAAGAATTTTTGGAGTGGATCAAACTCAAGGAAATACTAACCGGATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCTATGCATGGAGAGTTTTCTGTTAAGTCAGATGTATACAGCTTTGGCATACTCCTTATGGAGATTATAAGTGGCAAGAAGAATAGTTCTTTCCATCAAACAGATGAGGCTGAGGACCTTCTGAGCTATGCTTGGAAACTTTGGAAGGATGGAGAACCCTTGCTATTGTTGGACCCCACATTAAGAGAATCTTATAGTCCAAATGAAGTTACGAGATGCATCCACATTGGTCTACTATGTGTTCAAGAAGATCCAGCAGATAGACCTACAATGGCATCAATAGTTCTCATGCTTGACAGTCATTCTGTGTCTCTGCCAACACCTTCACGACCTGCATTTTTTCTCCAAAGTGGAACTGATCCAAACAAGCCGAAGGAGCTGCGATTTGATTCTACGACGAAATCAATATCAATTTCTGTCAATGAGATATATGCAATGAAGCCATTTTACAATATAACGTCAAAATCAGCTAAACCTCTTGTTCCTTCTCCTTCTTCTTCAGGAAAAAGCAGTGTCTCAATAATTGCTGCCATTGTTGTCTCAGTTGCTGTTTTGCTGGGGCTTTTCATTCTGGGCTGTCGTTTGCAGAGGAAGCGAAGAAAGAACTATGACACAGTTCTACAAGATAGCCTAAGATATGATATCACATTAGCAGACTCTCTGCAATTTGACTTGGCCACAATTGAAACTGCCACAAACCGGTTCTCCGATGATAAGAAAATAGGCCAAGGTGGATTTGGTGTAGTCTATAAGGGTACCCTTTACAATGGACAAGAGATAGCTGTGAAGAGGTTATCAAGAAGCTCTTTGCAGGGAGCAATAGAATTCAAGACTGAGGTTGCACTTGTGGCTCAACTTCAACACAAAAATTTAGCTTGGAAAAACTGGACGAATCGAACACCTTTGGAGTTGTTGGATTCGACACTGCGAGGTTCATACACCAAAACTGAAGTCATTAGATGCATCCACATTGCTTTACTATGTCTTCAGGAAAATCCGTCAGATAGACCCTCAATGGCATCTATAGCGCTTATGTTGAACAGTCATTCTGTTACTTTACCGTTGCCTCGACAACCTGCATCATTCCTACGAGGAGGAAGAACACCATCTGGATTCCGAAACGAGCTTGATTTTGATCAGTCTTGTAGCCGTACCATTCCATTTTCTATGAATGATGCATCAGTTACTGGGATACATCCACGATAA 2772 0.4361 MASHKLFLLFFFVGFLCSATTEAAEPNHLFHNCSASKTFTANSAFQLDRNTLFSFLVSNATGNTEYYNTTVAGGGETVYGYFMCRGGVLLADCHQCVIDATRKLSSECPFSKEGVTWYDECWLRYSDHSFFSTVDTRPRHCLANPFNVSDPVNFMRSLFNILNETADRAAKPAAGKWKFATKQVNISGFQTLYCLAQCTPYLSPQDCRRCLSGVIGDLPWCCEGRRGGRVLYPSCFVNYEFYPYFQAEAPPPTPALPTIVPPANTANSQGKVLTYMFEGKSGISSGTIVAIVVPISVAVLLFIVAVCYVRRRTRKKYDSVPDGKSANDMSTVDSLQFDFSTIEAATNKFSADNKLGEGGFGEVYKGTLLNGQEIAVKRLSQGSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNRSLDYILFDPKKQKQLDWAKRYKIIGGIARGIQYLHEDSRLKIIHRDLKASNILLDGDMNSKISDFGMARIFGVDQTQGNTNRIVGTYGYMSPEYAMHGEFSVKSDVYSFGILLMEIISGKKNSSFHQTDEAEDLLSYAWKLWKDGEPLLLLDPTLRESYSPNEVTRCIHIGLLCVQEDPADRPTMASIVLMLDSHSVSLPTPSRPAFFLQSGTDPNKPKELRFDSTTKSISISVNEIYAMKPFYNITSKSAKPLVPSPSSSGKSSVSIIAAIVVSVAVLLGLFILGCRLQRKRRKNYDTVLQDSLRYDITLADSLQFDLATIETATNRFSDDKKIGQGGFGVVYKGTLYNGQEIAVKRLSRSSLQGAIEFKTEVALVAQLQHKNLAWKNWTNRTPLELLDSTLRGSYTKTEVIRCIHIALLCLQENPSDRPSMASIALMLNSHSVTLPLPRQPASFLRGGRTPSGFRNELDFDQSCSRTIPFSMNDASVTGIHPR 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1591 923 Gene3D Transferase(Phosphotransferase) domain 1 425 627 - -
Dere10g1591 923 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 814 907 - -
Dere10g1591 923 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Dere10g1591 923 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Dere10g1591 923 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Dere10g1591 923 ProSiteProfiles Gnk2-homologous domain profile. 136 244 IPR002902 -
Dere10g1591 923 Pfam Protein tyrosine and serine/threonine kinase 351 618 IPR001245 GO:0004672|GO:0006468
Dere10g1591 923 SUPERFAMILY Protein kinase-like (PK-like) 335 639 IPR011009 -
Dere10g1591 923 SUPERFAMILY Protein kinase-like (PK-like) 738 813 IPR011009 -
Dere10g1591 923 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Dere10g1591 923 FunFam cysteine-rich receptor-like protein kinase 10 425 627 - -
Dere10g1591 923 SUPERFAMILY Protein kinase-like (PK-like) 815 882 IPR011009 -
Dere10g1591 923 FunFam Cysteine-rich receptor-like protein kinase 25 138 244 - -
Dere10g1591 923 SMART serkin_6 349 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1591 923 FunFam Cysteine-rich receptor-like protein kinase 10 310 424 - -
Dere10g1591 923 ProSiteProfiles Protein kinase domain profile. 349 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1591 923 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Dere10g1591 923 Gene3D Phosphorylase Kinase; domain 1 311 424 - -
Dere10g1591 923 Gene3D Phosphorylase Kinase; domain 1 718 815 - -
Dere10g1591 923 Gene3D - 26 130 IPR038408 -
Dere10g1591 923 Gene3D - 138 244 IPR038408 -
Dere10g1591 923 ProSitePatterns Protein kinases ATP-binding region signature. 763 785 IPR017441 GO:0005524
Dere10g1591 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Dere10g1591 923 CDD STKc_IRAK 355 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1591 Dere-ChrDere10 28330051 28339600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1591 814 923 Receptor kinase-like Gene Family AT4G05200 45.133 2.54e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g1591 PK_Tyr_Ser-Thr 1.9e-49 CL0016