Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1588 ATGGCCGTGCTTCCAAAGAGTAACAGAACCATCGCTATGATCAACTCTTCCTTCAACTTCATCCTGCTCGTTGTGTTTCTTAGCTTCCTCAATTTCCCTGTCACTGAAGCAGCAGAAAACCCCATTTTCCTCCGTGAAAACTGCACAGGCACTGCAACCTTCGCCCAAAATAGTGCCTTCGAATTGAACCTCAGGACCCTGCTCAGTTCCTTATATTCCAACGCCTCCGGCAACGCCGAATTCCACAACACCACCGTCGGCACCACCGCCGGCGGAAACAACTCCGACGCCGTTTATGGCCTCTACATGTGCCGCGGTGACGTCCCTCAGGATCTCTGCAAGGAATGCGTTTATAACGCAACACAACGACTAACAGGCTCATCAAACGTGTGTCCGTTTTCCAAAGGGGCTATACTCTGGTACGACGAATGTATGGTTCGGTATTCCGACCAGAATTTCTTCTCCAGGATGGAAACAAGGCCTAGAATGCGCCTGAGGAACACCGGGAATGTCACCGACGGAATCAAACAAAGGTTTATGACTTTGATGTACACAACCTTGAACGAAACGGCAGATGAGGCAGCGAAAACTCCGATAGGTGTTAAGAAATATGCGACGAGGCAAGCAAATCTCACTGCGTTTCAGACGCTGTACACTCTGACACAGTGCACGCCTGACCTGTCACCCCAAGATTGCAGAAGGTGTTTGAGCCTTGTGATTGAGGATGTTGCGTGGTGTTGTACTTACAGGATTGGAGGAAGAGTTCTTTATCCTAGCTGCAACTTCAGGTATGAATTGTACCCTTTCTACAGAGAGGCTTCGCGGGCACCATCCCCGACACCAGCAGCACCAGGGAATTTTACACCTTCTGCAGAACAGAAAGGGAAAAAAGGGATCTCGTCAGGGACAATTGTTGCAATTGTGGTTCCAGTTACAGTGGCGGTGCTTCTGTTTATAGCGGGCGTTTGTTTCTTAAGTAAAAGAGCAAGGAAGAAATATGACTCTGTGCCAGATGGAAAATCTGAAAATGGCATTACCACTGTGGAGTCACTGCAATTTGATTTCGGTACACTTGAAACAGCCACAAACAAGTTTTCTGCAGATAACAAGTTAGGTGAAGGTGGATTTGGAGAGGTTTACAAGGGCACGCTTCCAAGCGGACAGGCAATTGCTGTCAAGAGACTTTCCCAAGGCTCTGGACAAGGTAGGGAAGAATTCAAGAATGAAGTAGTGGTGGTTGCCAAGCTACAACACAGAAATTTAGTGAGGCTTCTAGGATTCTGCCTGCAAGGAGAAGAGAAAATACTCGTTTATGAATATGTACCCAACAGAAGTCTTGATTACATTCTTTTTGACCCTGAAAAGCAAAAACAGTTGGACTGGACAAAAAGGTATAGGATTATTGGAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCAAGGCTTAAAATTATACATCGTGATCTTAAAGCTAGCAACATATTGTTGGATGGTAATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATCTTTAAAGTTGATCAAACACAAGGAAATACAAGTCGAATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCTATGCATGGAGAATTTTCTGTTAAGTCTGATGTGTATAGCTTTGGTGTTCTCCTTCTGGAAATTATAAGTGGCAAAAAAAATAACTCCTTCTATCAAACAGACGGTGCAGAGGACCTTTTGAGCTATGCTTGGAAACTTTGGAAGGATGGAACACCCTTGGAACTGTTGGACCCCGCATTAAAAGGATCTTATACTCCAAATGAAGTTGTGAGATGCATCCACATTGGTCTACTGTGTGTTCAAGAAGATCCAGCAGATAGACCTACAATGGCAAGAATAGTTCTCATGCTTGATAGTTACTCTGTGACTCTGCCAATACCTACACAGCCTGCATTTTTCCTCCAGAGTGGAACTGATACAAATATGCCAAAGGGGCTGCAATTTGATCAATCTACGACCAAGTCATTACCAATGTCTGTGAATGAGATGTCTGTTAGTGAAATAACTCCTCGATAA 2073 0.4438 MAVLPKSNRTIAMINSSFNFILLVVFLSFLNFPVTEAAENPIFLRENCTGTATFAQNSAFELNLRTLLSSLYSNASGNAEFHNTTVGTTAGGNNSDAVYGLYMCRGDVPQDLCKECVYNATQRLTGSSNVCPFSKGAILWYDECMVRYSDQNFFSRMETRPRMRLRNTGNVTDGIKQRFMTLMYTTLNETADEAAKTPIGVKKYATRQANLTAFQTLYTLTQCTPDLSPQDCRRCLSLVIEDVAWCCTYRIGGRVLYPSCNFRYELYPFYREASRAPSPTPAAPGNFTPSAEQKGKKGISSGTIVAIVVPVTVAVLLFIAGVCFLSKRARKKYDSVPDGKSENGITTVESLQFDFGTLETATNKFSADNKLGEGGFGEVYKGTLPSGQAIAVKRLSQGSGQGREEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNRSLDYILFDPEKQKQLDWTKRYRIIGGIARGIQYLHEDSRLKIIHRDLKASNILLDGNMNPKISDFGMARIFKVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLLEIISGKKNNSFYQTDGAEDLLSYAWKLWKDGTPLELLDPALKGSYTPNEVVRCIHIGLLCVQEDPADRPTMARIVLMLDSYSVTLPIPTQPAFFLQSGTDTNMPKGLQFDQSTTKSLPMSVNEMSVSEITPR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1588 690 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Dere10g1588 690 FunFam cysteine-rich receptor-like protein kinase 10 441 643 - -
Dere10g1588 690 Gene3D Phosphorylase Kinase; domain 1 327 440 - -
Dere10g1588 690 ProSiteProfiles Gnk2-homologous domain profile. 159 269 IPR002902 -
Dere10g1588 690 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 688 - -
Dere10g1588 690 Pfam Salt stress response/antifungal 48 150 IPR002902 -
Dere10g1588 690 Pfam Salt stress response/antifungal 177 267 IPR002902 -
Dere10g1588 690 Gene3D Transferase(Phosphotransferase) domain 1 441 643 - -
Dere10g1588 690 FunFam Cysteine-rich receptor-like protein kinase 25 161 269 - -
Dere10g1588 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Dere10g1588 690 Pfam Protein tyrosine and serine/threonine kinase 367 634 IPR001245 GO:0004672|GO:0006468
Dere10g1588 690 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 41 152 - -
Dere10g1588 690 ProSiteProfiles Gnk2-homologous domain profile. 42 153 IPR002902 -
Dere10g1588 690 SUPERFAMILY Protein kinase-like (PK-like) 350 658 IPR011009 -
Dere10g1588 690 FunFam Cysteine-rich receptor-like protein kinase 10 327 440 - -
Dere10g1588 690 Gene3D - 162 269 IPR038408 -
Dere10g1588 690 Gene3D - 42 153 IPR038408 -
Dere10g1588 690 SMART serkin_6 365 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1588 690 ProSiteProfiles Protein kinase domain profile. 365 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1588 690 CDD STKc_IRAK 371 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1588 Dere-ChrDere10 28288406 28291408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1588 25 690 Receptor kinase-like Gene Family AT4G05200 54.505 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g1588 PK_Tyr_Ser-Thr 1.9e-49 CL0016