Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1581 ATGATTATGGCTTCCTACAAACTTTTCTTACTCTTCTTTGTTAGCTTCCTCTCTTCTGCTACTACTGCTTTAGCAGCTGAGCCTAGCTTCTTCTCTTCTGCTACTACTACTTTAGCAGCTGAGCCTACTTATCTTTACCACAACTGCTCTACCAACAAGACCTTCGCTGCCAATAGTGCCTTCCAGTTGGACCGAAACTCCCTCTTCTCTTCCTTAGCTTCCAACGCCCCCGCCAACACCGAGTTCTACAACACCACCGTCGCCGGTGGCGGCGACAGCGTCTACGGCCTCTTCATGTGCCGGGGTGACGTCACCCTCCCGGACTGCCACCAATGCGTCGTTAACGCAACCAGAAGATTAAACTCTGAGTGCCGATTGTCGAAGGAGGCCATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCCAACCGCTCTTTCTTCTCCACTGTCGACACAAGGCCTAGAGTCGGCCTCTTGAACAGCGGCAATGTCTCCGACCAGGCAGGCTTCATGCGGTTATTGTTCAAGACTCTGAACGAGACGGCAGATGAGGCGGCGAAACACGCTATGGGGCAAAAGAAATATGCGACGAAGCAGGCGAGTATTTCAGGGCTTCAGACTCTGTATTGTCTTGCTCAGTGCACGCCGGACCTTTCACCCCAAGATTGCCGAAGGTGTCTGAGTGGTGTGATTGGGGACCTTCCATGGTGTTGTACGGGAAAGCAAGGAGGAAGAGTTCTATACCCTAGCTGTAATTTTCGCTATGAATTGTACCCTTTCTATCACGCGGAAGCTCCAGCACCAACTCCTACACCAGCTACAATAGCTCCTCCTGCAAATACTACAGTTTCCCGAGGCAAAAGTGGGATCTCATCGGGGACAATTGTTGCGATTGTGGTTCCAATTTCAGTGGCCGTGCTGCTGTTTATAGTGGGCATCTGTTACTTGAGTAGAAGAATAAGGAAGAAATATGACTCTGTACCCGATGGAAAATCTGCAAATGACATCACCACTGTGGAGTCACTGCAATTTGATTTTAGTACAATTGAAGCAGCCACGAACAAGTTCTCTGCAGATAACAAGCTAGGTGAAGGTGGATTTGGGGAGGTTTACAAGGGCACGCTTCTGAACGGACAGGAAATAGCTGTCAAGAGACTCTCCCAAGGCTCTGGACAAGGTGGAGAAGAATTTAAGAATGAAGTAGTGGTGGTTGCGAAGCTACAACACAGAAATTTAGTAAGGCTTTTGGGATTCTGCTTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTGCCCAACAAAAGTCTTGATTACATCCTTTTTGACCCTGAGAAGCAAAGACAGTTGGGTTGGACAAAACGTTACAAGATTATTGGAGGAATTGCTCGAGGCATTCAATATCTTCATGAAGATTCAAGACTTAGAATTATACATCGTGATCTTAAAGCTAGTAACATATTGTTGGATGGTAATATGAATCCGAAAATCTCAGACTTTGGCATGGCAAAAATTTTTGGAGTCGATCAAACTCAAGGAAACACTAGTCGGATTGTTGGAACATATGGTTACATGGCTCCAGAATATGCTATGCAGGGAGAATTCTCTGTCAAGTCTGATGTATATAGTTTTGGTGTCCTTCTTATGGAGATTATAAGTGGCAAGAAGAATAGTTCTTTCTATCAAACAGATGGTGCTGAGGACCTTCTGAGCTATGCTTGGAAGCTTTGGAAGGATGGAGAACCCTTGCAATTGTTGGACCCCACATTAAGAGAATCTTATACTCCAAATGAAGTTATGAGATGCATCCACATCGGTCTACTGTGTGTTCAAGAAGATCCAGCAGAGAGACCTACGATGGCTTCGATAATTCTCATGCTTGATAGTTACACTGTGACTATGCCAACACCAACGCAGCCTGCATTTTTTGTCCACAGCGGAACTGATCCAAACATGCCAAAGGAGCTGCGATTTGATCAATCTACGACCAAATCAATACCAATGTCTGTCAATGAGATGTCAGTCAGTGAAGTAATTCCTCGATAA 2046 0.456 MIMASYKLFLLFFVSFLSSATTALAAEPSFFSSATTTLAAEPTYLYHNCSTNKTFAANSAFQLDRNSLFSSLASNAPANTEFYNTTVAGGGDSVYGLFMCRGDVTLPDCHQCVVNATRRLNSECRLSKEAIIWYDECLLRYSNRSFFSTVDTRPRVGLLNSGNVSDQAGFMRLLFKTLNETADEAAKHAMGQKKYATKQASISGLQTLYCLAQCTPDLSPQDCRRCLSGVIGDLPWCCTGKQGGRVLYPSCNFRYELYPFYHAEAPAPTPTPATIAPPANTTVSRGKSGISSGTIVAIVVPISVAVLLFIVGICYLSRRIRKKYDSVPDGKSANDITTVESLQFDFSTIEAATNKFSADNKLGEGGFGEVYKGTLLNGQEIAVKRLSQGSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYILFDPEKQRQLGWTKRYKIIGGIARGIQYLHEDSRLRIIHRDLKASNILLDGNMNPKISDFGMAKIFGVDQTQGNTSRIVGTYGYMAPEYAMQGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTDGAEDLLSYAWKLWKDGEPLQLLDPTLRESYTPNEVMRCIHIGLLCVQEDPAERPTMASIILMLDSYTVTMPTPTQPAFFVHSGTDPNMPKELRFDQSTTKSIPMSVNEMSVSEVIPR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1581 681 FunFam Cysteine-rich receptor-like protein kinase 10 318 431 - -
Dere10g1581 681 FunFam cysteine-rich receptor-like protein kinase 10 432 634 - -
Dere10g1581 681 SMART serkin_6 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1581 681 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Dere10g1581 681 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1581 681 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 42 145 - -
Dere10g1581 681 CDD STKc_IRAK 362 628 - -
Dere10g1581 681 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 45 677 - -
Dere10g1581 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Dere10g1581 681 ProSiteProfiles Gnk2-homologous domain profile. 43 146 IPR002902 -
Dere10g1581 681 SUPERFAMILY Protein kinase-like (PK-like) 341 650 IPR011009 -
Dere10g1581 681 Gene3D - 155 260 IPR038408 -
Dere10g1581 681 Gene3D - 40 146 IPR038408 -
Dere10g1581 681 ProSiteProfiles Gnk2-homologous domain profile. 152 260 IPR002902 -
Dere10g1581 681 Gene3D Phosphorylase Kinase; domain 1 320 431 - -
Dere10g1581 681 Pfam Salt stress response/antifungal 165 258 IPR002902 -
Dere10g1581 681 Pfam Salt stress response/antifungal 49 143 IPR002902 -
Dere10g1581 681 Gene3D Transferase(Phosphotransferase) domain 1 432 637 - -
Dere10g1581 681 Pfam Protein tyrosine and serine/threonine kinase 358 625 IPR001245 GO:0004672|GO:0006468
Dere10g1581 681 FunFam Cysteine-rich receptor-like protein kinase 25 154 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1581 Dere-ChrDere10 28155774 28158848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1581 37 681 Receptor kinase-like Gene Family AT4G05200 53.333 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g1581 PK_Tyr_Ser-Thr 1.2e-49 CL0016