Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1575 ATGTTTTGCTTCATGAGTTCTATCAAGGCAATTCTGCTTTTCTACTTTCTTCTGGGCCTTTTGAATGCAAGAACACAAGGCGAACCTATTTACATCACTAAATCATGTCCGAACACAACAACTTTTGCTCCAAACAGCACCTTCCAAACCAATCTTAATCACTTACTTTCTTCCCTTTCCTCGAACGCCAATCAAATTAATGGATTTTACAACACCACCGTTGGCCCAAACAACCCCAGCAACGCCGTCTACGGCCTCTTCCTCTGCCGCGGAGACGTCACCGTCCCGACGTGTCAAGACTGTGTTTCCACAGCGACCAAACAGGCCCTTCAAGAATGCCCCGTTGAGAAAGAATCCGTCATTTGGTACGACGAGTGCTTGTTACGATACTCCGACAAGTATTTCTTTTCCACCGCGCAAGAAAATCCCATGATTTCTTTGTTGAACACCGGCAATGTCTCAGACCAGAGTCGCTTCATGCAGTTGCTGGGTGATACTATGCAGGAGGTGGCGGAGCGAGCGGTGAACGGCGGTGGCGGCAAGAAATTCGCGACCAAAGAAGCAAACTTCAATTCTTTTCAAAATCTATATACTCTTGGACAGTGTACGCCGGATTTATCTAGGGATGATTGCAATAGGTGTCTGCACATAGCAATTGCATACCTACCGAATTGCTGTGATGGGAAGCAAGGAGGAAGAGTCCTCACTCCCAGTTGCTATATCAGGTACGAACTGTACCCATTTTACCAGGAGGTGCCTTCGCCACCAGCTCCTACGCCAGAATCAACTCCCCATGGTAAAAGCAAAACCTCGGCTGGGACAATTATTGCCATAGTTGTTCCAACAGTTATGTTCTTATTGCTAGTCTCGCTCTGCTGCTGGTACTTAAAGAGGAGAGCAAGGAAGAAGTATACTTCGGTTCCTAAACAAAATGGTACAGTAATTATTAAGTCTAGAAACAGGGTTGATCAAACCCAAGCAAACACAAATAGAGTTGTGGGCACCTATGGTTACATGTCTCCTGAATATGCAATGCACGGTCAGATTTCAATTAAATCTGATGTGTATAGTTTCGGTGTGCTGGTTCTAGAGATCATTAGTGGCAAGAAGAACACATCTTTCTATGTATCAGGTTATGCTGAAGACCTGATAAGCTACGCCTGGAACCTCTGGAGGGAAGGGACTCCCCTGGAATTGTTGGATCCTGCTCTGAGGGATTCTTATTCAAGAAATGAGGCTATTAGATGCATTCATATAAGCTTGCTGTGTGTTCAGGAAAACCCAGCTCAGAGACCTACAATGCAGTCCATTATTGTGATGCTTAGTAGTCACTCTATCACCCTGCCTGACCCTCAATCGCCTCTATTTTTTACTGATGACACTAGAACAGATTCAAACAAGCGAAACATCAATGAACACAGGTCTGACCAATCTACGAGCAAGTCAATGCAGTGGTCCATGAGTGAAGATACGATTTCTGACTTGTATCCTCGCTAG 1497 0.4509 MFCFMSSIKAILLFYFLLGLLNARTQGEPIYITKSCPNTTTFAPNSTFQTNLNHLLSSLSSNANQINGFYNTTVGPNNPSNAVYGLFLCRGDVTVPTCQDCVSTATKQALQECPVEKESVIWYDECLLRYSDKYFFSTAQENPMISLLNTGNVSDQSRFMQLLGDTMQEVAERAVNGGGGKKFATKEANFNSFQNLYTLGQCTPDLSRDDCNRCLHIAIAYLPNCCDGKQGGRVLTPSCYIRYELYPFYQEVPSPPAPTPESTPHGKSKTSAGTIIAIVVPTVMFLLLVSLCCWYLKRRARKKYTSVPKQNGTVIIKSRNRVDQTQANTNRVVGTYGYMSPEYAMHGQISIKSDVYSFGVLVLEIISGKKNTSFYVSGYAEDLISYAWNLWREGTPLELLDPALRDSYSRNEAIRCIHISLLCVQENPAQRPTMQSIIVMLSSHSITLPDPQSPLFFTDDTRTDSNKRNINEHRSDQSTSKSMQWSMSEDTISDLYPR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1575 498 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 320 446 - -
Dere10g1575 498 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 29 134 - -
Dere10g1575 498 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Dere10g1575 498 FunFam Cysteine-rich receptor-like protein kinase 25 143 248 - -
Dere10g1575 498 Gene3D Transferase(Phosphotransferase) domain 1 311 449 - -
Dere10g1575 498 Pfam Protein tyrosine and serine/threonine kinase 326 440 IPR001245 GO:0004672|GO:0006468
Dere10g1575 498 SUPERFAMILY Protein kinase-like (PK-like) 327 460 IPR011009 -
Dere10g1575 498 MobiDBLite consensus disorder prediction 457 498 - -
Dere10g1575 498 MobiDBLite consensus disorder prediction 461 475 - -
Dere10g1575 498 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 14 258 - -
Dere10g1575 498 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Dere10g1575 498 Pfam Salt stress response/antifungal 151 246 IPR002902 -
Dere10g1575 498 Gene3D - 29 135 IPR038408 -
Dere10g1575 498 Gene3D - 141 248 IPR038408 -
Dere10g1575 498 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Dere10g1575 498 MobiDBLite consensus disorder prediction 476 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1575 Dere-ChrDere10 27929136 27932812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1575 322 498 Receptor kinase-like Gene Family AT4G05200 53.672 3.26e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere10g1575 PK_Tyr_Ser-Thr 1.5e-09 CL0016