Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1544 ATGTTTCAACAGCCAAACATGTTTCATCCTCACATGCTAGATATGTCCCACAAGACCTCTTCCGACAGTGATCCAGTGGGAAGGACGACCAAGGACGATGATTACGAGACCAAATCGGTCACTGAGACAACCATGGAAACTCCTTCAGGTGACGACCAAGACCCCAACCAACGTCCCAAAAAGAAGCGCTACCACCGCCACACCCAACGCCAAATACAAGAGATGGAAGCCTTCTTCAAGGAGTGTCCTCACCCAGATGACAAACAAAGGAAAGAGCTAAGCCGTGAGCTGGGTTTAGAGCCCTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGAACCCAAATGAAGGCACAACATGAACGCCATGAGAATGCTATTTTGAAGGCTGAGAATGAAAAGCTTCGTGCTGAGAACAATAGGTACAAGGAAGCCCTCAGTAACGCTACATGCCCTAACTGTGGAGGCCCTGCAGCTCTTGGTGAAATGTCCTTTGACGAGCAGCACCTCAGGATTGAGAATGCTCGACTAAGAGAAGAGATAGATAGGATATCAGGAATTGCAGCCAAATACGTTGGAAAGCCAGTGACATCCTTTTCTCACCTTTCATCTCACGTGCCTTCACGCTCGCTTGAGGATCTTGGAGTTGGTAGTAACTTTGGGTCACAGTCAGGGATGGTAGGGGAAATGTACTGTGGAAGTAGTAGTGACCTTATTAGGTCACTCCCAGTGCCTTCTGAAGCTGACAAGCCCATGATTGTGGAGCTTGCTGTTGCAGCAATGGAAGAACTCACTAGAATGGCTCAGGCTGGAGACCCCCTGTGGGTTGTCTCTGGTGACCACTCTAGTACTCATGAGATTCTGAATGAAGATGAATACATAAGGACTTTTCCTAGGGGCATAGGTCCTAAACCCTTGGGGTTAAGATCTGAAGCCTCAAGGGAATCCACTGTGGTTATCATGAACCATATTAACCTTGTTGAGATTCTCATGGACGTGAATCAATGGTCAACAGTGTTTTGCGGTATTGTTTCAAGAGCGATGACACTTGAAGTCCTATCAACTGGAGTGGCAGGAAACTATAACGGAGCTTTGCAAGTGATGTCGGCCGAGTTCCAAGTCCCTTCACCTCTGGTTCCCACACGGGAGAACTACTTCGTAAGGTACTGTAAGCAGCACCCAGATGGGACATGGGCAGTGGTCGATGTTTCCTTGGACAACCTGCGACCTAATGCTTTATCTAGAAGCCGAAGAAGGCCTTCTGGTTGTGTGATTCAAGAACTGCCAAATGGGTACTCCAAGGTTACTTGGATTGAACATGTAGAAGTGGATGATAGAGCTGTGCACAATATATATAGACCTCTAGTCAATTCAGGCCTTGCCTTTGGAGCTAAACGTTGGGTGGCTACATTAGATAGACAATGTGAACGTCTTGCTAGTTCCATGGCCTGCAACATACCTGCAGGAGACCTTTGTGTGATAACAAGTGCTGAGGGAAGGAAGAGCATGCTGAAGCTAGCAGAGAGGATGGTGATGAGCTTTTGTACTGGTGTTGGGGCTTCCACAGCACATGCATGGACAACACTGTCAGCAACAGGGTGCGATGATGTGAGGGTGATGACCCGAAAGAGCATGGATGATCCAGGCAGGCCTCCTGGTATTGTTCTCAGTGCTGCTACTTCCTTCTGGCTTCCAGTTCCTCCAAACAAGGTCTTCAATTTCCTCCGAGATGAAAATTCCAGAAGTGAGTGGGATATTTTATCCAATGGGGGTCTCGTCCAAGAAATGGCACACATAGCAAATGGTCGTGATCCAGGCAACTGTGTCTCTCTACTTCGTGTCAATAGTGCAAATTCAAGCCAAAGCAACATGCTGATACTGCAGGAGAGCTGCACAGACTCAACAGGATCATATGTGATATATGCTCCTGTTGATATAGTGGCCATGAACGTAGTCCTAGGAGGAGGGGACCCTGACTACGTTGCCCTCTTGCCCTCTGGTTTCGCCATTCTTCCTGATGGCTCTTCACTCAACATCAATGGAGGAGGAGGGCCTATTCTAGACGTTGGATCTGGAGGGTCTCTTCTCACTGTTGCCTTCCAAATCTTAGTTGACTCAGTCCCAACTGCTAAACTCTCTCTGGGCTCAGTCGCCACTGTCAACAGCTTGATTAAGTGCACAGTTGAAAGGATCAAAGCTGCAGTCATGTGTGACACCACATAA 2220 0.4784 MFQQPNMFHPHMLDMSHKTSSDSDPVGRTTKDDDYETKSVTETTMETPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENNRYKEALSNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSFSHLSSHVPSRSLEDLGVGSNFGSQSGMVGEMYCGSSSDLIRSLPVPSEADKPMIVELAVAAMEELTRMAQAGDPLWVVSGDHSSTHEILNEDEYIRTFPRGIGPKPLGLRSEASRESTVVIMNHINLVEILMDVNQWSTVFCGIVSRAMTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHPDGTWAVVDVSLDNLRPNALSRSRRRPSGCVIQELPNGYSKVTWIEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASSMACNIPAGDLCVITSAEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSATGCDDVRVMTRKSMDDPGRPPGIVLSAATSFWLPVPPNKVFNFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVIYAPVDIVAMNVVLGGGDPDYVALLPSGFAILPDGSSLNINGGGGPILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMCDTT 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1544 739 SMART START_1 254 476 IPR002913 GO:0008289
Dere10g1544 739 MobiDBLite consensus disorder prediction 1 69 - -
Dere10g1544 739 FunFam Homeobox-leucine zipper protein GLABRA 2 254 475 - -
Dere10g1544 739 SUPERFAMILY Homeodomain-like 44 118 IPR009057 -
Dere10g1544 739 Pfam START domain 255 476 IPR002913 GO:0008289
Dere10g1544 739 ProSiteProfiles START domain profile. 245 479 IPR002913 GO:0008289
Dere10g1544 739 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Dere10g1544 739 SUPERFAMILY Bet v1-like 247 478 - -
Dere10g1544 739 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Dere10g1544 739 Coils Coil 112 147 - -
Dere10g1544 739 CDD START_ArGLABRA2_like 249 475 - -
Dere10g1544 739 Gene3D - 314 480 IPR023393 -
Dere10g1544 739 FunFam Homeobox-leucine zipper protein HDG1 49 134 - -
Dere10g1544 739 Gene3D - 47 134 - -
Dere10g1544 739 Pfam Homeodomain 61 116 IPR001356 GO:0003677
Dere10g1544 739 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 57 734 IPR042160 -
Dere10g1544 739 SUPERFAMILY Bet v1-like 497 731 - -
Dere10g1544 739 MobiDBLite consensus disorder prediction 24 40 - -
Dere10g1544 739 CDD homeodomain 61 119 IPR001356 GO:0003677
Dere10g1544 739 SMART HOX_1 59 122 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1544 Dere-ChrDere10 27547626 27551595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1544 4 737 Homeobox Transcription Factor Family AT4G04890 81.392 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere10g1544 START 1.5e-58 CL0209