Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1539 ATGATCTCTTCAATCAAGTGCACACCAGCTTCGTCCCTGAGCTCGTCTGCTTTCTCAAGCAGAAACCTTTCTGTTCAAACCCCTCAATTTTGTTACACATTACCCACTGTTCAAAATGTTAGACACAGCACGAATCCCTCTCTTTATTCCCAGAAACCTATTTACATTTCATCCACTGAGAATTTCTCATTGTTGGCAAAACCCAGAAAGAGGGTTTTAGAGTGTGAGGCATATGAGGCGGACAGGTCACAACCATTAGAGATTAATGTTGATGAAGGAGCTCGGGCGGAGGCAGCTCAGAAGCTCAAAATTGGTTTGTATTTTGCAACCTGGTGGGCTTTGAATGTGGTTTTCAACATATACAACAAAAAGGTCTTGAATGCTTTTCCTTATCCATGGCTTACTTCGACTCTGTCACTGGCTGCTGGGTCCCTCTTAATGTTAATCTCATGGGCCACGAGAATTGCTGATACCCCAAAAGTAAATTTGGAGTTTTGGAAAGCCCTCCTCCCTGTTGCTGTGGCGCACACAATCGGGCATGTTGCAGCAACTGTGAGTATGTCAAAAGTTGCAGTTTCATTCACCCACATCATCAAGAGTGGAGAGCCTGCTTTTAGTGTCCTGGTTTCAAGGTTCTTGCTTGGAGAGGCATTCCCTTTGCCAGTTTACCTGTCACTTGTCCCAATTATTGGTGGCTGTGCTCTTGCTGCCGTGACAGAGCTCAATTTCAATATGACAGGGTTTATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGCGAGGGATGAAGGGGATGTCTGTTAGCGGAATGAATTACTATGCTTGTCTTTCAATTTTGTCTCTGTTACTTCTTACACCTTTTGCCATTGCTGTGGAGGGCCCCAAGATGTGGGCTGCTGGCTGGCAAACTGCTATCTCTCAGATTGGTCCCAATTTTGTTTGGTGGGTAGCTGCCCAGAGTGTGTTCTACCACTTGTACAACCAAGTATCATACATGTCTCTCGATCAGATTTCCCCATTAACGTTTAGCATAGGGAATACAATGAAGAGAATTTCAGTTATTGTCTCTTCCATTATTATCTTCCGCACACCAGTTCAACCCATCAATGCCCTTGGGGCTGCCATTGCTGTTCTTGGAACCTTCATCTATTCACAGGCTAAACAGTAA 1188 0.4428 MISSIKCTPASSLSSSAFSSRNLSVQTPQFCYTLPTVQNVRHSTNPSLYSQKPIYISSTENFSLLAKPRKRVLECEAYEADRSQPLEINVDEGARAEAAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLLMLISWATRIADTPKVNLEFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGMSVSGMNYYACLSILSLLLLTPFAIAVEGPKMWAAGWQTAISQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFRTPVQPINALGAAIAVLGTFIYSQAKQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1539 395 Pfam Triose-phosphate Transporter family 102 391 IPR004853 -
Dere10g1539 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 238 - -
Dere10g1539 395 PANTHER SOLUTE CARRIER FAMILY 35 103 394 - -
Dere10g1539 395 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1539 Dere-ChrDere10 27493664 27496708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1539 51 395 Antiporters AT1G61800 82.029 0.0 575